Gene : Sobic.001G183000 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR22939//PTHR22939:SF97 - SERINE PROTEASE FAMILY S1C HTRA-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1899
Name:  ? Sobic.001G183000 Secondary Identifier:  ? PAC:37938126
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G183000 0.5kb upstream 0.5kb upstream 3238 true Chr01: 15500847-15504084 Sorghum bicolor
Sobic.001G183000 0.5kb upstream 0.5kb upstream 500 false Chr01: 15500847-15501346 Sorghum bicolor
Sobic.001G183000 0.5kb downstream 0.5kb downstream 3238 true Chr01: 15501347-15504584 Sorghum bicolor
Sobic.001G183000 0.5kb downstream 0.5kb downstream 500 false Chr01: 15504085-15504584 Sorghum bicolor
Sobic.001G183000 1.0kb upstream 1.0kb upstream 3738 true Chr01: 15500347-15504084 Sorghum bicolor
Sobic.001G183000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 15500347-15501346 Sorghum bicolor
Sobic.001G183000 1.0kb downstream 1.0kb downstream 3738 true Chr01: 15501347-15505084 Sorghum bicolor
Sobic.001G183000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 15504085-15505084 Sorghum bicolor
Sobic.001G183000 2.0kb upstream 2.0kb upstream 4738 true Chr01: 15499347-15504084 Sorghum bicolor
Sobic.001G183000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 15499347-15501346 Sorghum bicolor
Sobic.001G183000 2.0kb downstream 2.0kb downstream 4738 true Chr01: 15501347-15506084 Sorghum bicolor
Sobic.001G183000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 15504085-15506084 Sorghum bicolor
Sobic.001G183000 5.0kb upstream 5.0kb upstream 7738 true Chr01: 15496347-15504084 Sorghum bicolor
Sobic.001G183000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 15496347-15501346 Sorghum bicolor
Sobic.001G183000 5.0kb downstream 5.0kb downstream 7738 true Chr01: 15501347-15509084 Sorghum bicolor
Sobic.001G183000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 15504085-15509084 Sorghum bicolor
Sobic.001G183000 10.0kb upstream 10.0kb upstream 12738 true Chr01: 15491347-15504084 Sorghum bicolor
Sobic.001G183000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 15491347-15501346 Sorghum bicolor
Sobic.001G183000 10.0kb downstream 10.0kb downstream 12738 true Chr01: 15501347-15514084 Sorghum bicolor
Sobic.001G183000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 15504085-15514084 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122199458 5267 Panicoideae View MSA
124569044 5269 Grass View MSA
122044779 5273 Angiosperm View MSA
121347975 5274 Embryophyte View MSA
123424345 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.926        
cufflinks 11.59     High High
cufflinks 6.934        
cufflinks 4.678        
cufflinks 1.378        
cufflinks 11.851       High
cufflinks 8.759        
cufflinks 9.228     High High
cufflinks 2.899        
cufflinks 2.085        
cufflinks 0.166       Low
cufflinks 0.304       Low
cufflinks 2.818        
cufflinks 0.186       Low
cufflinks 3.272        
cufflinks 9.224       High
cufflinks 6.452        
cufflinks 9.892       High
cufflinks 6.012        
cufflinks 4.723        
cufflinks 2.311        
cufflinks 0.439       Low
cufflinks 0.218       Low
cufflinks 0.304       Low
cufflinks 14.51     High High
cufflinks 12.31     High High
cufflinks 0.322       Low
cufflinks 0.099       Low
cufflinks 11.185       High
cufflinks 2.566        

0 Strain