Gene : Sobic.001G173400 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR22870//PTHR22870:SF170 - REGULATOR OF CHROMOSOME CONDENSATION // REGULATOR OF CHROMOSOME CONDENSATION FAMILY PROTEIN Genomic Order:  1797
Name:  ? Sobic.001G173400 Secondary Identifier:  ? PAC:37942117
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G173400 0.5kb upstream 0.5kb upstream 6735 true Chr01: 14555202-14561936 Sorghum bicolor
Sobic.001G173400 0.5kb upstream 0.5kb upstream 500 false Chr01: 14561437-14561936 Sorghum bicolor
Sobic.001G173400 0.5kb downstream 0.5kb downstream 6735 true Chr01: 14554702-14561436 Sorghum bicolor
Sobic.001G173400 0.5kb downstream 0.5kb downstream 500 false Chr01: 14554702-14555201 Sorghum bicolor
Sobic.001G173400 1.0kb upstream 1.0kb upstream 7235 true Chr01: 14555202-14562436 Sorghum bicolor
Sobic.001G173400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 14561437-14562436 Sorghum bicolor
Sobic.001G173400 1.0kb downstream 1.0kb downstream 7235 true Chr01: 14554202-14561436 Sorghum bicolor
Sobic.001G173400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 14554202-14555201 Sorghum bicolor
Sobic.001G173400 2.0kb upstream 2.0kb upstream 8235 true Chr01: 14555202-14563436 Sorghum bicolor
Sobic.001G173400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 14561437-14563436 Sorghum bicolor
Sobic.001G173400 2.0kb downstream 2.0kb downstream 8235 true Chr01: 14553202-14561436 Sorghum bicolor
Sobic.001G173400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 14553202-14555201 Sorghum bicolor
Sobic.001G173400 5.0kb upstream 5.0kb upstream 11235 true Chr01: 14555202-14566436 Sorghum bicolor
Sobic.001G173400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 14561437-14566436 Sorghum bicolor
Sobic.001G173400 5.0kb downstream 5.0kb downstream 11235 true Chr01: 14550202-14561436 Sorghum bicolor
Sobic.001G173400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 14550202-14555201 Sorghum bicolor
Sobic.001G173400 10.0kb upstream 10.0kb upstream 16235 true Chr01: 14555202-14571436 Sorghum bicolor
Sobic.001G173400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 14561437-14571436 Sorghum bicolor
Sobic.001G173400 10.0kb downstream 10.0kb downstream 16235 true Chr01: 14545202-14561436 Sorghum bicolor
Sobic.001G173400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 14545202-14555201 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122196228 5267 Panicoideae View MSA
124572544 5269 Grass View MSA
122046241 5273 Angiosperm View MSA
121310578 5274 Embryophyte View MSA
123348026 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.753       Low
cufflinks 4.242        
cufflinks 7.19        
cufflinks 6.651        
cufflinks 5.103        
cufflinks 6.965        
cufflinks 4.82        
cufflinks 8.505       High
cufflinks 8.753       High
cufflinks 7.569        
cufflinks 3.655        
cufflinks 6.885        
cufflinks 5.146        
cufflinks 2.538       Low
cufflinks 6.492        
cufflinks 6.378        
cufflinks 5.379        
cufflinks 4.464        
cufflinks 4.189        
cufflinks 8.463       High
cufflinks 5.481        
cufflinks 2.738       Low
cufflinks 3.361        
cufflinks 3.149        
cufflinks 6.272        
cufflinks 7.228     High  
cufflinks 4.806        
cufflinks 11.732     High High
cufflinks 6.176        
cufflinks 5.725        

0 Strain