Gene : Sobic.003G440400 S. bicolor v3.1.1
Defline:  (1 of 4) 3.6.3.47 - Fatty-acyl-CoA-transporting ATPase Genomic Order:  4618
Name:  ? Sobic.003G440400 Secondary Identifier:  ? PAC:37916546
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G440400 0.5kb upstream 0.5kb upstream 12388 true Chr03: 73946707-73959094 Sorghum bicolor
Sobic.003G440400 0.5kb upstream 0.5kb upstream 500 false Chr03: 73946707-73947206 Sorghum bicolor
Sobic.003G440400 0.5kb downstream 0.5kb downstream 12388 true Chr03: 73947207-73959594 Sorghum bicolor
Sobic.003G440400 0.5kb downstream 0.5kb downstream 500 false Chr03: 73959095-73959594 Sorghum bicolor
Sobic.003G440400 1.0kb upstream 1.0kb upstream 12888 true Chr03: 73946207-73959094 Sorghum bicolor
Sobic.003G440400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 73946207-73947206 Sorghum bicolor
Sobic.003G440400 1.0kb downstream 1.0kb downstream 12888 true Chr03: 73947207-73960094 Sorghum bicolor
Sobic.003G440400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 73959095-73960094 Sorghum bicolor
Sobic.003G440400 2.0kb upstream 2.0kb upstream 13888 true Chr03: 73945207-73959094 Sorghum bicolor
Sobic.003G440400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 73945207-73947206 Sorghum bicolor
Sobic.003G440400 2.0kb downstream 2.0kb downstream 13888 true Chr03: 73947207-73961094 Sorghum bicolor
Sobic.003G440400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 73959095-73961094 Sorghum bicolor
Sobic.003G440400 5.0kb upstream 5.0kb upstream 16888 true Chr03: 73942207-73959094 Sorghum bicolor
Sobic.003G440400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 73942207-73947206 Sorghum bicolor
Sobic.003G440400 5.0kb downstream 5.0kb downstream 16888 true Chr03: 73947207-73964094 Sorghum bicolor
Sobic.003G440400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 73959095-73964094 Sorghum bicolor
Sobic.003G440400 10.0kb upstream 10.0kb upstream 21888 true Chr03: 73937207-73959094 Sorghum bicolor
Sobic.003G440400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 73937207-73947206 Sorghum bicolor
Sobic.003G440400 10.0kb downstream 10.0kb downstream 21888 true Chr03: 73947207-73969094 Sorghum bicolor
Sobic.003G440400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 73959095-73969094 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182285 5267 Panicoideae View MSA
124586419 5269 Grass View MSA
122046456 5273 Angiosperm View MSA
121348971 5274 Embryophyte View MSA
123424415 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.808       Low
cufflinks 11.612     High  
cufflinks 18.461     High High
cufflinks 14.347     High  
cufflinks 4.846       Low
cufflinks 9.606        
cufflinks 9.314        
cufflinks 9.623     High  
cufflinks 16.476     High  
cufflinks 20.867     High High
cufflinks 11.37        
cufflinks 17.787     High High
cufflinks 13.748     High  
cufflinks 12.812     High  
cufflinks 36.117     High High
cufflinks 15.852     High  
cufflinks 9.372        
cufflinks 9.089        
cufflinks 14.049     High  
cufflinks 14.157     High  
cufflinks 5.995       Low
cufflinks 8.927        
cufflinks 13.134     High  
cufflinks 12.053     High  
cufflinks 17.253     High High
cufflinks 11.701     High  
cufflinks 16.433     High  
cufflinks 5.501       Low
cufflinks 6.098       Low
cufflinks 18.522     High High

0 Strain