Gene : Sobic.001G162000 S. bicolor v3.1.1
Defline:  (1 of 1) K09550 - prefoldin subunit 4 (PFDN4) Genomic Order:  1685
Name:  ? Sobic.001G162000 Secondary Identifier:  ? PAC:37937530
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G162000 0.5kb upstream 0.5kb upstream 3242 true Chr01: 13343121-13346362 Sorghum bicolor
Sobic.001G162000 0.5kb upstream 0.5kb upstream 500 false Chr01: 13343121-13343620 Sorghum bicolor
Sobic.001G162000 0.5kb downstream 0.5kb downstream 3242 true Chr01: 13343621-13346862 Sorghum bicolor
Sobic.001G162000 0.5kb downstream 0.5kb downstream 500 false Chr01: 13346363-13346862 Sorghum bicolor
Sobic.001G162000 1.0kb upstream 1.0kb upstream 3742 true Chr01: 13342621-13346362 Sorghum bicolor
Sobic.001G162000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 13342621-13343620 Sorghum bicolor
Sobic.001G162000 1.0kb downstream 1.0kb downstream 3742 true Chr01: 13343621-13347362 Sorghum bicolor
Sobic.001G162000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 13346363-13347362 Sorghum bicolor
Sobic.001G162000 2.0kb upstream 2.0kb upstream 4742 true Chr01: 13341621-13346362 Sorghum bicolor
Sobic.001G162000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 13341621-13343620 Sorghum bicolor
Sobic.001G162000 2.0kb downstream 2.0kb downstream 4742 true Chr01: 13343621-13348362 Sorghum bicolor
Sobic.001G162000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 13346363-13348362 Sorghum bicolor
Sobic.001G162000 5.0kb upstream 5.0kb upstream 7742 true Chr01: 13338621-13346362 Sorghum bicolor
Sobic.001G162000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 13338621-13343620 Sorghum bicolor
Sobic.001G162000 5.0kb downstream 5.0kb downstream 7742 true Chr01: 13343621-13351362 Sorghum bicolor
Sobic.001G162000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 13346363-13351362 Sorghum bicolor
Sobic.001G162000 10.0kb upstream 10.0kb upstream 12742 true Chr01: 13333621-13346362 Sorghum bicolor
Sobic.001G162000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 13333621-13343620 Sorghum bicolor
Sobic.001G162000 10.0kb downstream 10.0kb downstream 12742 true Chr01: 13343621-13356362 Sorghum bicolor
Sobic.001G162000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 13346363-13356362 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179165 5267 Panicoideae View MSA
124569558 5269 Grass View MSA
122043024 5273 Angiosperm View MSA
121347563 5274 Embryophyte View MSA
123426081 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.536     High  
cufflinks 3.127       Low
cufflinks 4.887       Low
cufflinks 10.393        
cufflinks 10.462        
cufflinks 11.162        
cufflinks 9.886        
cufflinks 4.176       Low
cufflinks 12.967     High  
cufflinks 13.603     High  
cufflinks 11.697        
cufflinks 11.809     High  
cufflinks 10.19        
cufflinks 11.484        
cufflinks 8.307        
cufflinks 5.236       Low
cufflinks 10.754        
cufflinks 10.932        
cufflinks 4.341       Low
cufflinks 13.359     High  
cufflinks 12.846        
cufflinks 16.277     High High
cufflinks 13.018     High  
cufflinks 14.412     High  
cufflinks 3.613       Low
cufflinks 2.957       Low
cufflinks 8.46        
cufflinks 4.329       Low
cufflinks 7.304        
cufflinks 9.697        

0 Strain