Gene : Sobic.005G068800 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR13561:SF20 - MUTAGEN-SENSITIVE 101 Genomic Order:  690
Name:  ? Sobic.005G068800 Secondary Identifier:  ? PAC:37924875
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.005G068800 0.5kb upstream 0.5kb upstream 12463 true Chr05: 7957136-7969598 Sorghum bicolor
Sobic.005G068800 0.5kb upstream 0.5kb upstream 500 false Chr05: 7969099-7969598 Sorghum bicolor
Sobic.005G068800 0.5kb downstream 0.5kb downstream 12463 true Chr05: 7956636-7969098 Sorghum bicolor
Sobic.005G068800 0.5kb downstream 0.5kb downstream 500 false Chr05: 7956636-7957135 Sorghum bicolor
Sobic.005G068800 1.0kb upstream 1.0kb upstream 12963 true Chr05: 7957136-7970098 Sorghum bicolor
Sobic.005G068800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 7969099-7970098 Sorghum bicolor
Sobic.005G068800 1.0kb downstream 1.0kb downstream 12963 true Chr05: 7956136-7969098 Sorghum bicolor
Sobic.005G068800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 7956136-7957135 Sorghum bicolor
Sobic.005G068800 2.0kb upstream 2.0kb upstream 13963 true Chr05: 7957136-7971098 Sorghum bicolor
Sobic.005G068800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 7969099-7971098 Sorghum bicolor
Sobic.005G068800 2.0kb downstream 2.0kb downstream 13963 true Chr05: 7955136-7969098 Sorghum bicolor
Sobic.005G068800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 7955136-7957135 Sorghum bicolor
Sobic.005G068800 5.0kb upstream 5.0kb upstream 16963 true Chr05: 7957136-7974098 Sorghum bicolor
Sobic.005G068800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 7969099-7974098 Sorghum bicolor
Sobic.005G068800 5.0kb downstream 5.0kb downstream 16963 true Chr05: 7952136-7969098 Sorghum bicolor
Sobic.005G068800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 7952136-7957135 Sorghum bicolor
Sobic.005G068800 10.0kb upstream 10.0kb upstream 21963 true Chr05: 7957136-7979098 Sorghum bicolor
Sobic.005G068800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 7969099-7979098 Sorghum bicolor
Sobic.005G068800 10.0kb downstream 10.0kb downstream 21963 true Chr05: 7947136-7969098 Sorghum bicolor
Sobic.005G068800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 7947136-7957135 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189466 5267 Panicoideae View MSA
124569134 5269 Grass View MSA
122043112 5273 Angiosperm View MSA
121348037 5274 Embryophyte View MSA
123425629 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.211        
cufflinks 0.007     Low Low
cufflinks 0.047     Low Low
cufflinks 0.059     Low  
cufflinks 0.458        
cufflinks 0.103     Low  
cufflinks 0.303        
cufflinks 0.031     Low Low
cufflinks 0.189        
cufflinks 0.221        
cufflinks 0.449        
cufflinks 0.428        
cufflinks 0.161        
cufflinks 0.383        
cufflinks 0.237        
cufflinks 0.041     Low Low
cufflinks 0.295        
cufflinks 0.346        
cufflinks 0.041     Low Low
cufflinks 0.237        
cufflinks 0.988       High
cufflinks 0.523        
cufflinks 0.479        
cufflinks 0.497        
cufflinks 0.025     Low Low
cufflinks 0.01     Low Low
cufflinks 0.226        
cufflinks 0.079        
cufflinks 0.104        
cufflinks 0.37        

0 Strain