Gene : Sobic.005G068700 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR20275:SF6 - NADH KINASE POS5, MITOCHONDRIAL Genomic Order:  689
Name:  ? Sobic.005G068700 Secondary Identifier:  ? PAC:37924030
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-5083 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.005G068700 0.5kb upstream 0.5kb upstream 6805 true Chr05: 7941505-7948309 Sorghum bicolor
Sobic.005G068700 0.5kb upstream 0.5kb upstream 500 false Chr05: 7941505-7942004 Sorghum bicolor
Sobic.005G068700 0.5kb downstream 0.5kb downstream 6805 true Chr05: 7942005-7948809 Sorghum bicolor
Sobic.005G068700 0.5kb downstream 0.5kb downstream 500 false Chr05: 7948310-7948809 Sorghum bicolor
Sobic.005G068700 1.0kb upstream 1.0kb upstream 7305 true Chr05: 7941005-7948309 Sorghum bicolor
Sobic.005G068700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 7941005-7942004 Sorghum bicolor
Sobic.005G068700 1.0kb downstream 1.0kb downstream 7305 true Chr05: 7942005-7949309 Sorghum bicolor
Sobic.005G068700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 7948310-7949309 Sorghum bicolor
Sobic.005G068700 2.0kb upstream 2.0kb upstream 8305 true Chr05: 7940005-7948309 Sorghum bicolor
Sobic.005G068700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 7940005-7942004 Sorghum bicolor
Sobic.005G068700 2.0kb downstream 2.0kb downstream 8305 true Chr05: 7942005-7950309 Sorghum bicolor
Sobic.005G068700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 7948310-7950309 Sorghum bicolor
Sobic.005G068700 5.0kb upstream 5.0kb upstream 11305 true Chr05: 7937005-7948309 Sorghum bicolor
Sobic.005G068700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 7937005-7942004 Sorghum bicolor
Sobic.005G068700 5.0kb downstream 5.0kb downstream 11305 true Chr05: 7942005-7953309 Sorghum bicolor
Sobic.005G068700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 7948310-7953309 Sorghum bicolor
Sobic.005G068700 10.0kb upstream 10.0kb upstream 16305 true Chr05: 7932005-7948309 Sorghum bicolor
Sobic.005G068700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 7932005-7942004 Sorghum bicolor
Sobic.005G068700 10.0kb downstream 10.0kb downstream 16305 true Chr05: 7942005-7958309 Sorghum bicolor
Sobic.005G068700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 7948310-7958309 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190359 5267 Panicoideae View MSA
124570524 5269 Grass View MSA
122042984 5273 Angiosperm View MSA
121349739 5274 Embryophyte View MSA
123425454 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.824        
cufflinks 152.514     High High
cufflinks 42.919     High High
cufflinks 17.775     High  
cufflinks 4.307        
cufflinks 19.868     High  
cufflinks 29.376     High  
cufflinks 21.791     High  
cufflinks 10.827        
cufflinks 11.103        
cufflinks 5.487        
cufflinks 8.506        
cufflinks 7.4        
cufflinks 5.794        
cufflinks 11.824        
cufflinks 164.49     High High
cufflinks 29.621     High  
cufflinks 33.377     High  
cufflinks 57.774     High High
cufflinks 24.116     High  
cufflinks 5.29        
cufflinks 4.741        
cufflinks 6.96        
cufflinks 5.966        
cufflinks 172.692     High High
cufflinks 129.862     High High
cufflinks 6.856        
cufflinks 1.298       Low
cufflinks 8.114        
cufflinks 10.176        

0 Strain