Gene : Sobic.001G286100 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR14217//PTHR14217:SF5 - FAMILY NOT NAMED // INOSITOL-TETRAKISPHOSPHATE 1-KINASE 1 Genomic Order:  3011
Name:  ? Sobic.001G286100 Secondary Identifier:  ? PAC:37943836
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-6365 Sorghum bicolor pathologic  
Sbicolor PWY-6366 Sorghum bicolor pathologic  
Sbicolor PWY-6554 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G286100 0.5kb upstream 0.5kb upstream 4421 true Chr01: 56059508-56063928 Sorghum bicolor
Sobic.001G286100 0.5kb upstream 0.5kb upstream 500 false Chr01: 56059508-56060007 Sorghum bicolor
Sobic.001G286100 0.5kb downstream 0.5kb downstream 4421 true Chr01: 56060008-56064428 Sorghum bicolor
Sobic.001G286100 0.5kb downstream 0.5kb downstream 500 false Chr01: 56063929-56064428 Sorghum bicolor
Sobic.001G286100 1.0kb upstream 1.0kb upstream 4921 true Chr01: 56059008-56063928 Sorghum bicolor
Sobic.001G286100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 56059008-56060007 Sorghum bicolor
Sobic.001G286100 1.0kb downstream 1.0kb downstream 4921 true Chr01: 56060008-56064928 Sorghum bicolor
Sobic.001G286100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 56063929-56064928 Sorghum bicolor
Sobic.001G286100 2.0kb upstream 2.0kb upstream 5921 true Chr01: 56058008-56063928 Sorghum bicolor
Sobic.001G286100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 56058008-56060007 Sorghum bicolor
Sobic.001G286100 2.0kb downstream 2.0kb downstream 5921 true Chr01: 56060008-56065928 Sorghum bicolor
Sobic.001G286100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 56063929-56065928 Sorghum bicolor
Sobic.001G286100 5.0kb upstream 5.0kb upstream 8921 true Chr01: 56055008-56063928 Sorghum bicolor
Sobic.001G286100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 56055008-56060007 Sorghum bicolor
Sobic.001G286100 5.0kb downstream 5.0kb downstream 8921 true Chr01: 56060008-56068928 Sorghum bicolor
Sobic.001G286100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 56063929-56068928 Sorghum bicolor
Sobic.001G286100 10.0kb upstream 10.0kb upstream 13921 true Chr01: 56050008-56063928 Sorghum bicolor
Sobic.001G286100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 56050008-56060007 Sorghum bicolor
Sobic.001G286100 10.0kb downstream 10.0kb downstream 13921 true Chr01: 56060008-56073928 Sorghum bicolor
Sobic.001G286100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 56063929-56073928 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175654 5267 Panicoideae View MSA
124583006 5269 Grass View MSA
122047492 5273 Angiosperm View MSA
121347186 5274 Embryophyte View MSA
123428803 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.348       High
cufflinks 0.436       Low
cufflinks 0.562       Low
cufflinks 0.714        
cufflinks 1.065        
cufflinks 2.375       High
cufflinks 1.106        
cufflinks 0.673       Low
cufflinks 1.959        
cufflinks 2.461       High
cufflinks 1.149        
cufflinks 1.941        
cufflinks 1.67        
cufflinks 1.761        
cufflinks 1.043        
cufflinks 0.417       Low
cufflinks 0.942        
cufflinks 1.096        
cufflinks 0.395       Low
cufflinks 1.109        
cufflinks 1.903        
cufflinks 2.211        
cufflinks 1.4        
cufflinks 1.391        
cufflinks 0.537       Low
cufflinks 0.504       Low
cufflinks 0.641       Low
cufflinks 5.406       High
cufflinks 1.073        
cufflinks 1.413        

0 Strain