Gene : Sobic.001G287700 S. bicolor v3.1.1
Defline:  (1 of 12) PF04759 - Protein of unknown function, DUF617 (DUF617) Genomic Order:  3027
Name:  ? Sobic.001G287700 Secondary Identifier:  ? PAC:37945307
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G287700 0.5kb upstream 0.5kb upstream 1604 true Chr01: 56380654-56382257 Sorghum bicolor
Sobic.001G287700 0.5kb upstream 0.5kb upstream 500 false Chr01: 56380654-56381153 Sorghum bicolor
Sobic.001G287700 0.5kb downstream 0.5kb downstream 1604 true Chr01: 56381154-56382757 Sorghum bicolor
Sobic.001G287700 0.5kb downstream 0.5kb downstream 500 false Chr01: 56382258-56382757 Sorghum bicolor
Sobic.001G287700 1.0kb upstream 1.0kb upstream 2104 true Chr01: 56380154-56382257 Sorghum bicolor
Sobic.001G287700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 56380154-56381153 Sorghum bicolor
Sobic.001G287700 1.0kb downstream 1.0kb downstream 2104 true Chr01: 56381154-56383257 Sorghum bicolor
Sobic.001G287700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 56382258-56383257 Sorghum bicolor
Sobic.001G287700 2.0kb upstream 2.0kb upstream 3104 true Chr01: 56379154-56382257 Sorghum bicolor
Sobic.001G287700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 56379154-56381153 Sorghum bicolor
Sobic.001G287700 2.0kb downstream 2.0kb downstream 3104 true Chr01: 56381154-56384257 Sorghum bicolor
Sobic.001G287700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 56382258-56384257 Sorghum bicolor
Sobic.001G287700 5.0kb upstream 5.0kb upstream 6104 true Chr01: 56376154-56382257 Sorghum bicolor
Sobic.001G287700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 56376154-56381153 Sorghum bicolor
Sobic.001G287700 5.0kb downstream 5.0kb downstream 6104 true Chr01: 56381154-56387257 Sorghum bicolor
Sobic.001G287700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 56382258-56387257 Sorghum bicolor
Sobic.001G287700 10.0kb upstream 10.0kb upstream 11104 true Chr01: 56371154-56382257 Sorghum bicolor
Sobic.001G287700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 56371154-56381153 Sorghum bicolor
Sobic.001G287700 10.0kb downstream 10.0kb downstream 11104 true Chr01: 56381154-56392257 Sorghum bicolor
Sobic.001G287700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 56382258-56392257 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175948 5267 Panicoideae View MSA
124581681 5269 Grass View MSA
122044454 5273 Angiosperm View MSA
121349765 5274 Embryophyte View MSA
123381434 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.052     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.296       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.025     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.099        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.024     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.021     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.062     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.044     Low  
cufflinks 0.058     Low  

0 Strain