Gene : Sobic.001G282900 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR10739//PTHR10739:SF30 - CYTIDYLYLTRANSFERASE // SUBFAMILY NOT NAMED Genomic Order:  2976
Name:  ? Sobic.001G282900 Secondary Identifier:  ? PAC:37939518
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-3561 Sorghum bicolor pathologic  
Sbicolor PWY3O-450 Sorghum bicolor pathologic  
Sbicolor PWY4FS-2 Sorghum bicolor pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G282900 0.5kb upstream 0.5kb upstream 4064 true Chr01: 55511862-55515925 Sorghum bicolor
Sobic.001G282900 0.5kb upstream 0.5kb upstream 500 false Chr01: 55511862-55512361 Sorghum bicolor
Sobic.001G282900 0.5kb downstream 0.5kb downstream 4064 true Chr01: 55512362-55516425 Sorghum bicolor
Sobic.001G282900 0.5kb downstream 0.5kb downstream 500 false Chr01: 55515926-55516425 Sorghum bicolor
Sobic.001G282900 1.0kb upstream 1.0kb upstream 4564 true Chr01: 55511362-55515925 Sorghum bicolor
Sobic.001G282900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 55511362-55512361 Sorghum bicolor
Sobic.001G282900 1.0kb downstream 1.0kb downstream 4564 true Chr01: 55512362-55516925 Sorghum bicolor
Sobic.001G282900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 55515926-55516925 Sorghum bicolor
Sobic.001G282900 2.0kb upstream 2.0kb upstream 5564 true Chr01: 55510362-55515925 Sorghum bicolor
Sobic.001G282900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 55510362-55512361 Sorghum bicolor
Sobic.001G282900 2.0kb downstream 2.0kb downstream 5564 true Chr01: 55512362-55517925 Sorghum bicolor
Sobic.001G282900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 55515926-55517925 Sorghum bicolor
Sobic.001G282900 5.0kb upstream 5.0kb upstream 8564 true Chr01: 55507362-55515925 Sorghum bicolor
Sobic.001G282900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 55507362-55512361 Sorghum bicolor
Sobic.001G282900 5.0kb downstream 5.0kb downstream 8564 true Chr01: 55512362-55520925 Sorghum bicolor
Sobic.001G282900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 55515926-55520925 Sorghum bicolor
Sobic.001G282900 10.0kb upstream 10.0kb upstream 13564 true Chr01: 55502362-55515925 Sorghum bicolor
Sobic.001G282900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 55502362-55512361 Sorghum bicolor
Sobic.001G282900 10.0kb downstream 10.0kb downstream 13564 true Chr01: 55512362-55525925 Sorghum bicolor
Sobic.001G282900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 55515926-55525925 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183693 5267 Panicoideae View MSA
124582845 5269 Grass View MSA
122047197 5273 Angiosperm View MSA
121348751 5274 Embryophyte View MSA
123428717 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 45.083     High  
cufflinks 11.26     High Low
cufflinks 81.989     High High
cufflinks 63.786     High  
cufflinks 36.428     High  
cufflinks 64.86     High  
cufflinks 24.947     High  
cufflinks 16.837     High Low
cufflinks 29.398     High  
cufflinks 34.842     High  
cufflinks 70.753     High High
cufflinks 26.406     High  
cufflinks 50.622     High  
cufflinks 39.749     High  
cufflinks 78.407     High High
cufflinks 19.176     High Low
cufflinks 26.19     High  
cufflinks 24.138     High  
cufflinks 43.304     High  
cufflinks 20.305     High  
cufflinks 13.358       Low
cufflinks 39.408     High  
cufflinks 47.524     High  
cufflinks 43.327     High  
cufflinks 8.315       Low
cufflinks 7.331     High Low
cufflinks 64.938     High  
cufflinks 63.34     High  
cufflinks 33.235     High  
cufflinks 65.202     High  

0 Strain