Gene : Sobic.001G283700 S. bicolor v3.1.1
Defline:  (1 of 1) K00630 - glycerol-3-phosphate O-acyltransferase (ATS1) Genomic Order:  2984
Name:  ? Sobic.001G283700 Secondary Identifier:  ? PAC:37942963
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY0-1319 Sorghum bicolor pathologic  
Sbicolor PWY4FS-7 Sorghum bicolor pathologic  
Sbicolor PWY-7411 Sorghum bicolor pathologic  
Sbicolor TRIGLSYN-PWY Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G283700 0.5kb upstream 0.5kb upstream 17438 true Chr01: 55609081-55626518 Sorghum bicolor
Sobic.001G283700 0.5kb upstream 0.5kb upstream 500 false Chr01: 55626019-55626518 Sorghum bicolor
Sobic.001G283700 0.5kb downstream 0.5kb downstream 17438 true Chr01: 55608581-55626018 Sorghum bicolor
Sobic.001G283700 0.5kb downstream 0.5kb downstream 500 false Chr01: 55608581-55609080 Sorghum bicolor
Sobic.001G283700 1.0kb upstream 1.0kb upstream 17938 true Chr01: 55609081-55627018 Sorghum bicolor
Sobic.001G283700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 55626019-55627018 Sorghum bicolor
Sobic.001G283700 1.0kb downstream 1.0kb downstream 17938 true Chr01: 55608081-55626018 Sorghum bicolor
Sobic.001G283700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 55608081-55609080 Sorghum bicolor
Sobic.001G283700 2.0kb upstream 2.0kb upstream 18938 true Chr01: 55609081-55628018 Sorghum bicolor
Sobic.001G283700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 55626019-55628018 Sorghum bicolor
Sobic.001G283700 2.0kb downstream 2.0kb downstream 18938 true Chr01: 55607081-55626018 Sorghum bicolor
Sobic.001G283700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 55607081-55609080 Sorghum bicolor
Sobic.001G283700 5.0kb upstream 5.0kb upstream 21938 true Chr01: 55609081-55631018 Sorghum bicolor
Sobic.001G283700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 55626019-55631018 Sorghum bicolor
Sobic.001G283700 5.0kb downstream 5.0kb downstream 21938 true Chr01: 55604081-55626018 Sorghum bicolor
Sobic.001G283700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 55604081-55609080 Sorghum bicolor
Sobic.001G283700 10.0kb upstream 10.0kb upstream 26938 true Chr01: 55609081-55636018 Sorghum bicolor
Sobic.001G283700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 55626019-55636018 Sorghum bicolor
Sobic.001G283700 10.0kb downstream 10.0kb downstream 26938 true Chr01: 55599081-55626018 Sorghum bicolor
Sobic.001G283700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 55599081-55609080 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176479 5267 Panicoideae View MSA
124583790 5269 Grass View MSA
122046647 5273 Angiosperm View MSA
121346869 5274 Embryophyte View MSA
123424445 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.41       Low
cufflinks 1.443       High
cufflinks 1.284        
cufflinks 1.445       High
cufflinks 0.653        
cufflinks 1.275        
cufflinks 1.35        
cufflinks 2.088       High
cufflinks 0.906        
cufflinks 0.939        
cufflinks 0.483        
cufflinks 0.577        
cufflinks 0.612        
cufflinks 0.375       Low
cufflinks 0.826        
cufflinks 1.363        
cufflinks 1.342        
cufflinks 1.64       High
cufflinks 0.75        
cufflinks 1.121        
cufflinks 0.945        
cufflinks 0.521        
cufflinks 0.456       Low
cufflinks 0.458       Low
cufflinks 1.309        
cufflinks 1.813       High
cufflinks 0.573        
cufflinks 0.564        
cufflinks 2.1       High
cufflinks 0.772        

0 Strain