Gene : Sobic.001G278700 S. bicolor v3.1.1
Defline:  (1 of 5) 2.7.1.134 - Inositol-tetrakisphosphate 1-kinase / Inositol-trisphosphate 6-kinase Genomic Order:  2935
Name:  ? Sobic.001G278700 Secondary Identifier:  ? PAC:37943611
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-6365 Sorghum bicolor pathologic  
Sbicolor PWY-6366 Sorghum bicolor pathologic  
Sbicolor PWY-6554 Sorghum bicolor pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G278700 0.5kb upstream 0.5kb upstream 7220 true Chr01: 54336853-54344072 Sorghum bicolor
Sobic.001G278700 0.5kb upstream 0.5kb upstream 500 false Chr01: 54336853-54337352 Sorghum bicolor
Sobic.001G278700 0.5kb downstream 0.5kb downstream 7220 true Chr01: 54337353-54344572 Sorghum bicolor
Sobic.001G278700 0.5kb downstream 0.5kb downstream 500 false Chr01: 54344073-54344572 Sorghum bicolor
Sobic.001G278700 1.0kb upstream 1.0kb upstream 7720 true Chr01: 54336353-54344072 Sorghum bicolor
Sobic.001G278700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 54336353-54337352 Sorghum bicolor
Sobic.001G278700 1.0kb downstream 1.0kb downstream 7720 true Chr01: 54337353-54345072 Sorghum bicolor
Sobic.001G278700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 54344073-54345072 Sorghum bicolor
Sobic.001G278700 2.0kb upstream 2.0kb upstream 8720 true Chr01: 54335353-54344072 Sorghum bicolor
Sobic.001G278700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 54335353-54337352 Sorghum bicolor
Sobic.001G278700 2.0kb downstream 2.0kb downstream 8720 true Chr01: 54337353-54346072 Sorghum bicolor
Sobic.001G278700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 54344073-54346072 Sorghum bicolor
Sobic.001G278700 5.0kb upstream 5.0kb upstream 11720 true Chr01: 54332353-54344072 Sorghum bicolor
Sobic.001G278700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 54332353-54337352 Sorghum bicolor
Sobic.001G278700 5.0kb downstream 5.0kb downstream 11720 true Chr01: 54337353-54349072 Sorghum bicolor
Sobic.001G278700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 54344073-54349072 Sorghum bicolor
Sobic.001G278700 10.0kb upstream 10.0kb upstream 16720 true Chr01: 54327353-54344072 Sorghum bicolor
Sobic.001G278700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 54327353-54337352 Sorghum bicolor
Sobic.001G278700 10.0kb downstream 10.0kb downstream 16720 true Chr01: 54337353-54354072 Sorghum bicolor
Sobic.001G278700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 54344073-54354072 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041123 5273 Angiosperm View MSA
122176188 5267 Panicoideae View MSA
124570359 5269 Grass View MSA
121347833 5274 Embryophyte View MSA
123428803 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.54        
cufflinks 2.165        
cufflinks 1.412       Low
cufflinks 1.747       Low
cufflinks 4.962        
cufflinks 2.515        
cufflinks 8.336       High
cufflinks 6.648       High
cufflinks 3.284        
cufflinks 4.795        
cufflinks 3.33        
cufflinks 2.861        
cufflinks 3.274        
cufflinks 2.022        
cufflinks 3.385        
cufflinks 1.936       Low
cufflinks 8.572       High
cufflinks 5.182       High
cufflinks 1.96       Low
cufflinks 2.976        
cufflinks 7.658       High
cufflinks 2.971        
cufflinks 3.266        
cufflinks 2.886        
cufflinks 2.235        
cufflinks 2.868        
cufflinks 2.158        
cufflinks 1.815       Low
cufflinks 5.19       High
cufflinks 3.696        

0 Strain