Gene : Sobic.001G280300 S. bicolor v3.1.1
Defline:  (1 of 1) PF01453//PF07714 - D-mannose binding lectin (B_lectin) // Protein tyrosine kinase (Pkinase_Tyr) Genomic Order:  2952
Name:  ? Sobic.001G280300 Secondary Identifier:  ? PAC:37944438
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G280300 0.5kb upstream 0.5kb upstream 3570 true Chr01: 54938715-54942284 Sorghum bicolor
Sobic.001G280300 0.5kb upstream 0.5kb upstream 500 false Chr01: 54941785-54942284 Sorghum bicolor
Sobic.001G280300 0.5kb downstream 0.5kb downstream 3570 true Chr01: 54938215-54941784 Sorghum bicolor
Sobic.001G280300 0.5kb downstream 0.5kb downstream 500 false Chr01: 54938215-54938714 Sorghum bicolor
Sobic.001G280300 1.0kb upstream 1.0kb upstream 4070 true Chr01: 54938715-54942784 Sorghum bicolor
Sobic.001G280300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 54941785-54942784 Sorghum bicolor
Sobic.001G280300 1.0kb downstream 1.0kb downstream 4070 true Chr01: 54937715-54941784 Sorghum bicolor
Sobic.001G280300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 54937715-54938714 Sorghum bicolor
Sobic.001G280300 2.0kb upstream 2.0kb upstream 5070 true Chr01: 54938715-54943784 Sorghum bicolor
Sobic.001G280300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 54941785-54943784 Sorghum bicolor
Sobic.001G280300 2.0kb downstream 2.0kb downstream 5070 true Chr01: 54936715-54941784 Sorghum bicolor
Sobic.001G280300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 54936715-54938714 Sorghum bicolor
Sobic.001G280300 5.0kb upstream 5.0kb upstream 8070 true Chr01: 54938715-54946784 Sorghum bicolor
Sobic.001G280300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 54941785-54946784 Sorghum bicolor
Sobic.001G280300 5.0kb downstream 5.0kb downstream 8070 true Chr01: 54933715-54941784 Sorghum bicolor
Sobic.001G280300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 54933715-54938714 Sorghum bicolor
Sobic.001G280300 10.0kb upstream 10.0kb upstream 13070 true Chr01: 54938715-54951784 Sorghum bicolor
Sobic.001G280300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 54941785-54951784 Sorghum bicolor
Sobic.001G280300 10.0kb downstream 10.0kb downstream 13070 true Chr01: 54928715-54941784 Sorghum bicolor
Sobic.001G280300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 54928715-54938714 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177352 5267 Panicoideae View MSA
124571264 5269 Grass View MSA
122048307 5273 Angiosperm View MSA
121310924 5274 Embryophyte View MSA
123348296 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.799       High
cufflinks 2.919        
cufflinks 4.837        
cufflinks 5.342        
cufflinks 2.311        
cufflinks 4.414        
cufflinks 2.955        
cufflinks 4.379        
cufflinks 3.686        
cufflinks 1.819        
cufflinks 7.443       High
cufflinks 3.672        
cufflinks 1.573       Low
cufflinks 4.447        
cufflinks 1.75        
cufflinks 2.571        
cufflinks 1.599       Low
cufflinks 1.69       Low
cufflinks 5.231        
cufflinks 1.691       Low
cufflinks 0.496       Low
cufflinks 3.911        
cufflinks 3.076        
cufflinks 2.659        
cufflinks 9.9     High High
cufflinks 3.884        
cufflinks 3.417        
cufflinks 0.975       Low
cufflinks 1.761        
cufflinks 2.651        

0 Strain