Gene : 29904.t000101 R. communis v0.1
Defline:  (1 of 1) PTHR10543//PTHR10543:SF48 - BETA-CAROTENE DIOXYGENASE // 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED6, CHLOROPLASTIC Genomic Order:  101
Name:  ? 29904.t000101 Secondary Identifier:  ? PAC:16812632
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Rcommunis PWY-695 Ricinus communis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
29904.t000101 0.5kb upstream 0.5kb upstream 2357 true 29904: 685548-687904 Ricinus communis
29904.t000101 0.5kb upstream 0.5kb upstream 500 false 29904: 685548-686047 Ricinus communis
29904.t000101 0.5kb downstream 0.5kb downstream 2357 true 29904: 686048-688404 Ricinus communis
29904.t000101 0.5kb downstream 0.5kb downstream 500 false 29904: 687905-688404 Ricinus communis
29904.t000101 1.0kb upstream 1.0kb upstream 2857 true 29904: 685048-687904 Ricinus communis
29904.t000101 1.0kb upstream 1.0kb upstream 1000 false 29904: 685048-686047 Ricinus communis
29904.t000101 1.0kb downstream 1.0kb downstream 2857 true 29904: 686048-688904 Ricinus communis
29904.t000101 1.0kb downstream 1.0kb downstream 1000 false 29904: 687905-688904 Ricinus communis
29904.t000101 2.0kb upstream 2.0kb upstream 3857 true 29904: 684048-687904 Ricinus communis
29904.t000101 2.0kb upstream 2.0kb upstream 2000 false 29904: 684048-686047 Ricinus communis
29904.t000101 2.0kb downstream 2.0kb downstream 3857 true 29904: 686048-689904 Ricinus communis
29904.t000101 2.0kb downstream 2.0kb downstream 2000 false 29904: 687905-689904 Ricinus communis
29904.t000101 5.0kb upstream 5.0kb upstream 6857 true 29904: 681048-687904 Ricinus communis
29904.t000101 5.0kb upstream 5.0kb upstream 5000 false 29904: 681048-686047 Ricinus communis
29904.t000101 5.0kb downstream 5.0kb downstream 6857 true 29904: 686048-692904 Ricinus communis
29904.t000101 5.0kb downstream 5.0kb downstream 5000 false 29904: 687905-692904 Ricinus communis
29904.t000101 10.0kb upstream 10.0kb upstream 11857 true 29904: 676048-687904 Ricinus communis
29904.t000101 10.0kb upstream 10.0kb upstream 10000 false 29904: 676048-686047 Ricinus communis
29904.t000101 10.0kb downstream 10.0kb downstream 11857 true 29904: 686048-697904 Ricinus communis
29904.t000101 10.0kb downstream 10.0kb downstream 10000 false 29904: 687905-697904 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122452979 5262 Malpighiales View MSA
124242947 5268 Malvidae View MSA
124068526 5270 Rosid View MSA
123741505 5271 Pentapetalae View MSA
122796781 5272 Eudicot View MSA
122050852 5273 Angiosperm View MSA
121350265 5274 Embryophyte View MSA
123428777 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain