Gene : Sobic.001G249000 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR22950//PTHR22950:SF279 - AMINO ACID TRANSPORTER // SUBFAMILY NOT NAMED Genomic Order:  2580
Name:  ? Sobic.001G249000 Secondary Identifier:  ? PAC:37940771
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G249000 0.5kb upstream 0.5kb upstream 2946 true Chr01: 26846301-26849246 Sorghum bicolor
Sobic.001G249000 0.5kb upstream 0.5kb upstream 500 false Chr01: 26848747-26849246 Sorghum bicolor
Sobic.001G249000 0.5kb downstream 0.5kb downstream 2946 true Chr01: 26845801-26848746 Sorghum bicolor
Sobic.001G249000 0.5kb downstream 0.5kb downstream 500 false Chr01: 26845801-26846300 Sorghum bicolor
Sobic.001G249000 1.0kb upstream 1.0kb upstream 3446 true Chr01: 26846301-26849746 Sorghum bicolor
Sobic.001G249000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 26848747-26849746 Sorghum bicolor
Sobic.001G249000 1.0kb downstream 1.0kb downstream 3446 true Chr01: 26845301-26848746 Sorghum bicolor
Sobic.001G249000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 26845301-26846300 Sorghum bicolor
Sobic.001G249000 2.0kb upstream 2.0kb upstream 4446 true Chr01: 26846301-26850746 Sorghum bicolor
Sobic.001G249000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 26848747-26850746 Sorghum bicolor
Sobic.001G249000 2.0kb downstream 2.0kb downstream 4446 true Chr01: 26844301-26848746 Sorghum bicolor
Sobic.001G249000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 26844301-26846300 Sorghum bicolor
Sobic.001G249000 5.0kb upstream 5.0kb upstream 7446 true Chr01: 26846301-26853746 Sorghum bicolor
Sobic.001G249000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 26848747-26853746 Sorghum bicolor
Sobic.001G249000 5.0kb downstream 5.0kb downstream 7446 true Chr01: 26841301-26848746 Sorghum bicolor
Sobic.001G249000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 26841301-26846300 Sorghum bicolor
Sobic.001G249000 10.0kb upstream 10.0kb upstream 12446 true Chr01: 26846301-26858746 Sorghum bicolor
Sobic.001G249000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 26848747-26858746 Sorghum bicolor
Sobic.001G249000 10.0kb downstream 10.0kb downstream 12446 true Chr01: 26836301-26848746 Sorghum bicolor
Sobic.001G249000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 26836301-26846300 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188158 5267 Panicoideae View MSA
124571448 5269 Grass View MSA
122049335 5273 Angiosperm View MSA
123429000 5275 Viridiplantae View MSA
121348814 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.088        
cufflinks 0.234        
cufflinks 0.426        
cufflinks 1.233       High
cufflinks 0.279        
cufflinks 0.286        
cufflinks 0.403        
cufflinks 0.134        
cufflinks 0.533       High
cufflinks 0.497       High
cufflinks 0.107        
cufflinks 0.204        
cufflinks 0.144        
cufflinks 0.095     Low  
cufflinks 0.269        
cufflinks 0.328        
cufflinks 0.358        
cufflinks 0.278        
cufflinks 0.126        
cufflinks 0.956       High
cufflinks 0.046     Low Low
cufflinks 0.112     Low  
cufflinks 0.132        
cufflinks 0.081     Low Low
cufflinks 1.062       High
cufflinks 0.278        
cufflinks 0.164        
cufflinks 1.097       High
cufflinks 0.066     Low Low
cufflinks 0.237        

0 Strain