Gene : Sobic.005G098800 S. bicolor v3.1.1
Defline:  (1 of 1) K14575 - AAA family ATPase (AFG2, DRG1, SPATA5) Genomic Order:  1016
Name:  ? Sobic.005G098800 Secondary Identifier:  ? PAC:37922926
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.005G098800 0.5kb upstream 0.5kb upstream 9731 true Chr05: 16158317-16168047 Sorghum bicolor
Sobic.005G098800 0.5kb upstream 0.5kb upstream 500 false Chr05: 16167548-16168047 Sorghum bicolor
Sobic.005G098800 0.5kb downstream 0.5kb downstream 9731 true Chr05: 16157817-16167547 Sorghum bicolor
Sobic.005G098800 0.5kb downstream 0.5kb downstream 500 false Chr05: 16157817-16158316 Sorghum bicolor
Sobic.005G098800 1.0kb upstream 1.0kb upstream 10231 true Chr05: 16158317-16168547 Sorghum bicolor
Sobic.005G098800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 16167548-16168547 Sorghum bicolor
Sobic.005G098800 1.0kb downstream 1.0kb downstream 10231 true Chr05: 16157317-16167547 Sorghum bicolor
Sobic.005G098800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 16157317-16158316 Sorghum bicolor
Sobic.005G098800 2.0kb upstream 2.0kb upstream 11231 true Chr05: 16158317-16169547 Sorghum bicolor
Sobic.005G098800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 16167548-16169547 Sorghum bicolor
Sobic.005G098800 2.0kb downstream 2.0kb downstream 11231 true Chr05: 16156317-16167547 Sorghum bicolor
Sobic.005G098800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 16156317-16158316 Sorghum bicolor
Sobic.005G098800 5.0kb upstream 5.0kb upstream 14231 true Chr05: 16158317-16172547 Sorghum bicolor
Sobic.005G098800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 16167548-16172547 Sorghum bicolor
Sobic.005G098800 5.0kb downstream 5.0kb downstream 14231 true Chr05: 16153317-16167547 Sorghum bicolor
Sobic.005G098800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 16153317-16158316 Sorghum bicolor
Sobic.005G098800 10.0kb upstream 10.0kb upstream 19231 true Chr05: 16158317-16177547 Sorghum bicolor
Sobic.005G098800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 16167548-16177547 Sorghum bicolor
Sobic.005G098800 10.0kb downstream 10.0kb downstream 19231 true Chr05: 16148317-16167547 Sorghum bicolor
Sobic.005G098800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 16148317-16158316 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122198382 5267 Panicoideae View MSA
124573326 5269 Grass View MSA
122041889 5273 Angiosperm View MSA
121345411 5274 Embryophyte View MSA
123426108 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.738        
cufflinks 0.049       Low
cufflinks 0.38        
cufflinks 0.841        
cufflinks 2.18        
cufflinks 1.362        
cufflinks 0.893        
cufflinks 0.096       Low
cufflinks 2.274        
cufflinks 2.225        
cufflinks 1.294        
cufflinks 1.575        
cufflinks 1.25        
cufflinks 1.31        
cufflinks 0.844        
cufflinks 0.263       Low
cufflinks 0.864        
cufflinks 0.962        
cufflinks 0.205       Low
cufflinks 0.72        
cufflinks 5.024       High
cufflinks 1.682        
cufflinks 1.55        
cufflinks 1.889        
cufflinks 0.158       Low
cufflinks 0.046       Low
cufflinks 1.42        
cufflinks 3.382       High
cufflinks 0.464        
cufflinks 1.402        

0 Strain