Gene : Sobic.005G102500 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR12606//PTHR12606:SF38 - SENTRIN/SUMO-SPECIFIC PROTEASE // SUBFAMILY NOT NAMED Genomic Order:  1057
Name:  ? Sobic.005G102500 Secondary Identifier:  ? PAC:37924678
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.005G102500 0.5kb upstream 0.5kb upstream 7815 true Chr05: 18036497-18044311 Sorghum bicolor
Sobic.005G102500 0.5kb upstream 0.5kb upstream 500 false Chr05: 18036497-18036996 Sorghum bicolor
Sobic.005G102500 0.5kb downstream 0.5kb downstream 7815 true Chr05: 18036997-18044811 Sorghum bicolor
Sobic.005G102500 0.5kb downstream 0.5kb downstream 500 false Chr05: 18044312-18044811 Sorghum bicolor
Sobic.005G102500 1.0kb upstream 1.0kb upstream 8315 true Chr05: 18035997-18044311 Sorghum bicolor
Sobic.005G102500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 18035997-18036996 Sorghum bicolor
Sobic.005G102500 1.0kb downstream 1.0kb downstream 8315 true Chr05: 18036997-18045311 Sorghum bicolor
Sobic.005G102500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 18044312-18045311 Sorghum bicolor
Sobic.005G102500 2.0kb upstream 2.0kb upstream 9315 true Chr05: 18034997-18044311 Sorghum bicolor
Sobic.005G102500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 18034997-18036996 Sorghum bicolor
Sobic.005G102500 2.0kb downstream 2.0kb downstream 9315 true Chr05: 18036997-18046311 Sorghum bicolor
Sobic.005G102500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 18044312-18046311 Sorghum bicolor
Sobic.005G102500 5.0kb upstream 5.0kb upstream 12315 true Chr05: 18031997-18044311 Sorghum bicolor
Sobic.005G102500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 18031997-18036996 Sorghum bicolor
Sobic.005G102500 5.0kb downstream 5.0kb downstream 12315 true Chr05: 18036997-18049311 Sorghum bicolor
Sobic.005G102500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 18044312-18049311 Sorghum bicolor
Sobic.005G102500 10.0kb upstream 10.0kb upstream 17315 true Chr05: 18026997-18044311 Sorghum bicolor
Sobic.005G102500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 18026997-18036996 Sorghum bicolor
Sobic.005G102500 10.0kb downstream 10.0kb downstream 17315 true Chr05: 18036997-18054311 Sorghum bicolor
Sobic.005G102500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 18044312-18054311 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176628 5267 Panicoideae View MSA
124581726 5269 Grass View MSA
122049176 5273 Angiosperm View MSA
123429184 5275 Viridiplantae View MSA
121311282 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.384       High
cufflinks 0.649       Low
cufflinks 1.413        
cufflinks 1.138        
cufflinks 2.135        
cufflinks 1.572        
cufflinks 1.572        
cufflinks 0.741       Low
cufflinks 0.958        
cufflinks 1.257        
cufflinks 1.368        
cufflinks 1.197        
cufflinks 1.469        
cufflinks 1.186        
cufflinks 2.631       High
cufflinks 0.997        
cufflinks 1.914        
cufflinks 1.967        
cufflinks 0.949        
cufflinks 1.901        
cufflinks 2.95       High
cufflinks 1.102        
cufflinks 1.567        
cufflinks 1.372        
cufflinks 0.568       Low
cufflinks 0.476       Low
cufflinks 1.197        
cufflinks 6.674       High
cufflinks 1.482        
cufflinks 3.13       High

0 Strain