Gene : Sobic.001G235700 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR10741//PTHR10741:SF2 - TRANSLIN AND TRANSLIN ASSOCIATED PROTEIN X // TRANSLIN Genomic Order:  2444
Name:  ? Sobic.001G235700 Secondary Identifier:  ? PAC:37939182
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G235700 0.5kb upstream 0.5kb upstream 7936 true Chr01: 23766207-23774142 Sorghum bicolor
Sobic.001G235700 0.5kb upstream 0.5kb upstream 500 false Chr01: 23773643-23774142 Sorghum bicolor
Sobic.001G235700 0.5kb downstream 0.5kb downstream 7936 true Chr01: 23765707-23773642 Sorghum bicolor
Sobic.001G235700 0.5kb downstream 0.5kb downstream 500 false Chr01: 23765707-23766206 Sorghum bicolor
Sobic.001G235700 1.0kb upstream 1.0kb upstream 8436 true Chr01: 23766207-23774642 Sorghum bicolor
Sobic.001G235700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 23773643-23774642 Sorghum bicolor
Sobic.001G235700 1.0kb downstream 1.0kb downstream 8436 true Chr01: 23765207-23773642 Sorghum bicolor
Sobic.001G235700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 23765207-23766206 Sorghum bicolor
Sobic.001G235700 2.0kb upstream 2.0kb upstream 9436 true Chr01: 23766207-23775642 Sorghum bicolor
Sobic.001G235700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 23773643-23775642 Sorghum bicolor
Sobic.001G235700 2.0kb downstream 2.0kb downstream 9436 true Chr01: 23764207-23773642 Sorghum bicolor
Sobic.001G235700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 23764207-23766206 Sorghum bicolor
Sobic.001G235700 5.0kb upstream 5.0kb upstream 12436 true Chr01: 23766207-23778642 Sorghum bicolor
Sobic.001G235700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 23773643-23778642 Sorghum bicolor
Sobic.001G235700 5.0kb downstream 5.0kb downstream 12436 true Chr01: 23761207-23773642 Sorghum bicolor
Sobic.001G235700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 23761207-23766206 Sorghum bicolor
Sobic.001G235700 10.0kb upstream 10.0kb upstream 17436 true Chr01: 23766207-23783642 Sorghum bicolor
Sobic.001G235700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 23773643-23783642 Sorghum bicolor
Sobic.001G235700 10.0kb downstream 10.0kb downstream 17436 true Chr01: 23756207-23773642 Sorghum bicolor
Sobic.001G235700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 23756207-23766206 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122195017 5267 Panicoideae View MSA
124570028 5269 Grass View MSA
122045225 5273 Angiosperm View MSA
121345043 5274 Embryophyte View MSA
123426526 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.664       High
cufflinks 0.028     Low Low
cufflinks 0.083       Low
cufflinks 0.233        
cufflinks 1.092        
cufflinks 0.49        
cufflinks 0.505        
cufflinks 0.036     Low Low
cufflinks 0.741        
cufflinks 0.856        
cufflinks 0.653        
cufflinks 0.573        
cufflinks 0.433        
cufflinks 0.616        
cufflinks 0.558        
cufflinks 0.067     Low Low
cufflinks 0.603        
cufflinks 0.626        
cufflinks 0.04     Low Low
cufflinks 0.382        
cufflinks 2.208       High
cufflinks 1.013        
cufflinks 0.751        
cufflinks 0.793        
cufflinks 0.03     Low Low
cufflinks 0.018     Low Low
cufflinks 0.435        
cufflinks 1.083        
cufflinks 0.27        
cufflinks 1.293        

0 Strain