Gene : Sobic.001G231200 S. bicolor v3.1.1
Defline:  similar to Expressed protein Genomic Order:  2398
Name:  ? Sobic.001G231200 Secondary Identifier:  ? PAC:37944885
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G231200 0.5kb upstream 0.5kb upstream 2783 true Chr01: 22336849-22339631 Sorghum bicolor
Sobic.001G231200 0.5kb upstream 0.5kb upstream 500 false Chr01: 22339132-22339631 Sorghum bicolor
Sobic.001G231200 0.5kb downstream 0.5kb downstream 2783 true Chr01: 22336349-22339131 Sorghum bicolor
Sobic.001G231200 0.5kb downstream 0.5kb downstream 500 false Chr01: 22336349-22336848 Sorghum bicolor
Sobic.001G231200 1.0kb upstream 1.0kb upstream 3283 true Chr01: 22336849-22340131 Sorghum bicolor
Sobic.001G231200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 22339132-22340131 Sorghum bicolor
Sobic.001G231200 1.0kb downstream 1.0kb downstream 3283 true Chr01: 22335849-22339131 Sorghum bicolor
Sobic.001G231200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 22335849-22336848 Sorghum bicolor
Sobic.001G231200 2.0kb upstream 2.0kb upstream 4283 true Chr01: 22336849-22341131 Sorghum bicolor
Sobic.001G231200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 22339132-22341131 Sorghum bicolor
Sobic.001G231200 2.0kb downstream 2.0kb downstream 4283 true Chr01: 22334849-22339131 Sorghum bicolor
Sobic.001G231200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 22334849-22336848 Sorghum bicolor
Sobic.001G231200 5.0kb upstream 5.0kb upstream 7283 true Chr01: 22336849-22344131 Sorghum bicolor
Sobic.001G231200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 22339132-22344131 Sorghum bicolor
Sobic.001G231200 5.0kb downstream 5.0kb downstream 7283 true Chr01: 22331849-22339131 Sorghum bicolor
Sobic.001G231200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 22331849-22336848 Sorghum bicolor
Sobic.001G231200 10.0kb upstream 10.0kb upstream 12283 true Chr01: 22336849-22349131 Sorghum bicolor
Sobic.001G231200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 22339132-22349131 Sorghum bicolor
Sobic.001G231200 10.0kb downstream 10.0kb downstream 12283 true Chr01: 22326849-22339131 Sorghum bicolor
Sobic.001G231200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 22326849-22336848 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179202 5267 Panicoideae View MSA
124580612 5269 Grass View MSA
122047818 5273 Angiosperm View MSA
121348418 5274 Embryophyte View MSA
123380857 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 47.259     High  
cufflinks 0.954       Low
cufflinks 1.348       Low
cufflinks 2.429       Low
cufflinks 62.195     High High
cufflinks 3.41       Low
cufflinks 32.62     High  
cufflinks 6.92        
cufflinks 10.642        
cufflinks 12.228     High  
cufflinks 17.705     High  
cufflinks 28.249     High  
cufflinks 13.627     High  
cufflinks 24.067     High  
cufflinks 18.966     High  
cufflinks 1.612       Low
cufflinks 38.028     High  
cufflinks 37.158     High  
cufflinks 2.476       Low
cufflinks 38.773     High  
cufflinks 43.91     High  
cufflinks 30.424     High  
cufflinks 31.425     High  
cufflinks 31.935     High  
cufflinks 1.35       Low
cufflinks 1.345       Low
cufflinks 15.704     High  
cufflinks 9.385        
cufflinks 28.625     High  
cufflinks 30.585     High  

0 Strain