Gene : Sobic.005G027840 S. bicolor v3.1.1
Defline:  (1 of 7) K17964 - leucine-rich PPR motif-containing protein, mitochondrial (LRPPRC) Genomic Order:  272
Name:  ? Sobic.005G027840 Secondary Identifier:  ? PAC:37924565
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.005G027840 0.5kb upstream 0.5kb upstream 4151 true Chr05: 2460471-2464621 Sorghum bicolor
Sobic.005G027840 0.5kb upstream 0.5kb upstream 500 false Chr05: 2460471-2460970 Sorghum bicolor
Sobic.005G027840 0.5kb downstream 0.5kb downstream 4151 true Chr05: 2460971-2465121 Sorghum bicolor
Sobic.005G027840 0.5kb downstream 0.5kb downstream 500 false Chr05: 2464622-2465121 Sorghum bicolor
Sobic.005G027840 1.0kb upstream 1.0kb upstream 4651 true Chr05: 2459971-2464621 Sorghum bicolor
Sobic.005G027840 1.0kb upstream 1.0kb upstream 1000 false Chr05: 2459971-2460970 Sorghum bicolor
Sobic.005G027840 1.0kb downstream 1.0kb downstream 4651 true Chr05: 2460971-2465621 Sorghum bicolor
Sobic.005G027840 1.0kb downstream 1.0kb downstream 1000 false Chr05: 2464622-2465621 Sorghum bicolor
Sobic.005G027840 2.0kb upstream 2.0kb upstream 5651 true Chr05: 2458971-2464621 Sorghum bicolor
Sobic.005G027840 2.0kb upstream 2.0kb upstream 2000 false Chr05: 2458971-2460970 Sorghum bicolor
Sobic.005G027840 2.0kb downstream 2.0kb downstream 5651 true Chr05: 2460971-2466621 Sorghum bicolor
Sobic.005G027840 2.0kb downstream 2.0kb downstream 2000 false Chr05: 2464622-2466621 Sorghum bicolor
Sobic.005G027840 5.0kb upstream 5.0kb upstream 8651 true Chr05: 2455971-2464621 Sorghum bicolor
Sobic.005G027840 5.0kb upstream 5.0kb upstream 5000 false Chr05: 2455971-2460970 Sorghum bicolor
Sobic.005G027840 5.0kb downstream 5.0kb downstream 8651 true Chr05: 2460971-2469621 Sorghum bicolor
Sobic.005G027840 5.0kb downstream 5.0kb downstream 5000 false Chr05: 2464622-2469621 Sorghum bicolor
Sobic.005G027840 10.0kb upstream 10.0kb upstream 13651 true Chr05: 2450971-2464621 Sorghum bicolor
Sobic.005G027840 10.0kb upstream 10.0kb upstream 10000 false Chr05: 2450971-2460970 Sorghum bicolor
Sobic.005G027840 10.0kb downstream 10.0kb downstream 13651 true Chr05: 2460971-2474621 Sorghum bicolor
Sobic.005G027840 10.0kb downstream 10.0kb downstream 10000 false Chr05: 2464622-2474621 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122030818 5273 Angiosperm View MSA
122200825 5267 Panicoideae View MSA
124468584 5269 Grass View MSA
121299946 5274 Embryophyte View MSA
123337766 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.687        
cufflinks 0.542       Low
cufflinks 1.626        
cufflinks 2.357        
cufflinks 4.128       High
cufflinks 2.951        
cufflinks 2.361        
cufflinks 0.874       Low
cufflinks 5.652       High
cufflinks 4.6       High
cufflinks 2.32        
cufflinks 4.128       High
cufflinks 2.938        
cufflinks 2.798        
cufflinks 2.898        
cufflinks 1.223       Low
cufflinks 2.301        
cufflinks 2.269        
cufflinks 1.369        
cufflinks 3.202        
cufflinks 7.459       High
cufflinks 2.099        
cufflinks 2.881        
cufflinks 2.555        
cufflinks 1.419        
cufflinks 0.671       Low
cufflinks 2.806        
cufflinks 0.701       Low
cufflinks 1.638        
cufflinks 3.328        

0 Strain