Gene : Sobic.001G353400 S. bicolor v3.1.1
Defline:  (1 of 4) PTHR22847//PTHR22847:SF453 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  3711
Name:  ? Sobic.001G353400 Secondary Identifier:  ? PAC:37942998
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G353400 0.5kb upstream 0.5kb upstream 6329 true Chr01: 64352146-64358474 Sorghum bicolor
Sobic.001G353400 0.5kb upstream 0.5kb upstream 500 false Chr01: 64357975-64358474 Sorghum bicolor
Sobic.001G353400 0.5kb downstream 0.5kb downstream 6329 true Chr01: 64351646-64357974 Sorghum bicolor
Sobic.001G353400 0.5kb downstream 0.5kb downstream 500 false Chr01: 64351646-64352145 Sorghum bicolor
Sobic.001G353400 1.0kb upstream 1.0kb upstream 6829 true Chr01: 64352146-64358974 Sorghum bicolor
Sobic.001G353400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 64357975-64358974 Sorghum bicolor
Sobic.001G353400 1.0kb downstream 1.0kb downstream 6829 true Chr01: 64351146-64357974 Sorghum bicolor
Sobic.001G353400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 64351146-64352145 Sorghum bicolor
Sobic.001G353400 2.0kb upstream 2.0kb upstream 7829 true Chr01: 64352146-64359974 Sorghum bicolor
Sobic.001G353400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 64357975-64359974 Sorghum bicolor
Sobic.001G353400 2.0kb downstream 2.0kb downstream 7829 true Chr01: 64350146-64357974 Sorghum bicolor
Sobic.001G353400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 64350146-64352145 Sorghum bicolor
Sobic.001G353400 5.0kb upstream 5.0kb upstream 10829 true Chr01: 64352146-64362974 Sorghum bicolor
Sobic.001G353400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 64357975-64362974 Sorghum bicolor
Sobic.001G353400 5.0kb downstream 5.0kb downstream 10829 true Chr01: 64347146-64357974 Sorghum bicolor
Sobic.001G353400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 64347146-64352145 Sorghum bicolor
Sobic.001G353400 10.0kb upstream 10.0kb upstream 15829 true Chr01: 64352146-64367974 Sorghum bicolor
Sobic.001G353400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 64357975-64367974 Sorghum bicolor
Sobic.001G353400 10.0kb downstream 10.0kb downstream 15829 true Chr01: 64342146-64357974 Sorghum bicolor
Sobic.001G353400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 64342146-64352145 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122197478 5267 Panicoideae View MSA
124569547 5269 Grass View MSA
122045317 5273 Angiosperm View MSA
121348063 5274 Embryophyte View MSA
123428605 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.474        
cufflinks 14.493     High High
cufflinks 18.974     High High
cufflinks 31.386     High High
cufflinks 0.008     Low Low
cufflinks 8.07        
cufflinks 1.951        
cufflinks 3.142        
cufflinks 0.058     Low Low
cufflinks 0.161       Low
cufflinks 0.581        
cufflinks 0.578        
cufflinks 0.521        
cufflinks 0.463        
cufflinks 1.551        
cufflinks 16.879     High High
cufflinks 2.597        
cufflinks 1.575        
cufflinks 18.7     High High
cufflinks 4.04        
cufflinks 0.035     Low Low
cufflinks 0.141       Low
cufflinks 0.328        
cufflinks 0.171        
cufflinks 35.531     High High
cufflinks 5.633        
cufflinks 11.987     High High
cufflinks 22.913     High High
cufflinks 0.374        
cufflinks 1.984        

0 Strain