Gene : Sobic.005G028800 S. bicolor v3.1.1
Defline:  (1 of 5) PF03435 - Saccharopine dehydrogenase NADP binding domain (Sacchrp_dh_NADP) Genomic Order:  282
Name:  ? Sobic.005G028800 Secondary Identifier:  ? PAC:37925194
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.005G028800 0.5kb upstream 0.5kb upstream 4975 true Chr05: 2574014-2578988 Sorghum bicolor
Sobic.005G028800 0.5kb upstream 0.5kb upstream 500 false Chr05: 2574014-2574513 Sorghum bicolor
Sobic.005G028800 0.5kb downstream 0.5kb downstream 4975 true Chr05: 2574514-2579488 Sorghum bicolor
Sobic.005G028800 0.5kb downstream 0.5kb downstream 500 false Chr05: 2578989-2579488 Sorghum bicolor
Sobic.005G028800 1.0kb upstream 1.0kb upstream 5475 true Chr05: 2573514-2578988 Sorghum bicolor
Sobic.005G028800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 2573514-2574513 Sorghum bicolor
Sobic.005G028800 1.0kb downstream 1.0kb downstream 5475 true Chr05: 2574514-2579988 Sorghum bicolor
Sobic.005G028800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 2578989-2579988 Sorghum bicolor
Sobic.005G028800 2.0kb upstream 2.0kb upstream 6475 true Chr05: 2572514-2578988 Sorghum bicolor
Sobic.005G028800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 2572514-2574513 Sorghum bicolor
Sobic.005G028800 2.0kb downstream 2.0kb downstream 6475 true Chr05: 2574514-2580988 Sorghum bicolor
Sobic.005G028800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 2578989-2580988 Sorghum bicolor
Sobic.005G028800 5.0kb upstream 5.0kb upstream 9475 true Chr05: 2569514-2578988 Sorghum bicolor
Sobic.005G028800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 2569514-2574513 Sorghum bicolor
Sobic.005G028800 5.0kb downstream 5.0kb downstream 9475 true Chr05: 2574514-2583988 Sorghum bicolor
Sobic.005G028800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 2578989-2583988 Sorghum bicolor
Sobic.005G028800 10.0kb upstream 10.0kb upstream 14475 true Chr05: 2564514-2578988 Sorghum bicolor
Sobic.005G028800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 2564514-2574513 Sorghum bicolor
Sobic.005G028800 10.0kb downstream 10.0kb downstream 14475 true Chr05: 2574514-2588988 Sorghum bicolor
Sobic.005G028800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 2578989-2588988 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122196317 5267 Panicoideae View MSA
124569214 5269 Grass View MSA
122051589 5273 Angiosperm View MSA
121345153 5274 Embryophyte View MSA
123426869 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.819        
cufflinks 30.799     High High
cufflinks 23.586     High High
cufflinks 12.332     High  
cufflinks 1.767        
cufflinks 12.69        
cufflinks 15.307     High  
cufflinks 19.836     High High
cufflinks 3.716        
cufflinks 4.093        
cufflinks 0.316       Low
cufflinks 0.562       Low
cufflinks 2.892        
cufflinks 0.345       Low
cufflinks 8.32        
cufflinks 21.719     High High
cufflinks 14.569     High  
cufflinks 17.505     High High
cufflinks 10.445        
cufflinks 13.395     High  
cufflinks 3.041        
cufflinks 0.538       Low
cufflinks 0.487       Low
cufflinks 0.549       Low
cufflinks 12.385     High  
cufflinks 26.648     High High
cufflinks 0.227       Low
cufflinks 2.301        
cufflinks 18.793     High High
cufflinks 7.153        

0 Strain