Gene : Sobic.005G031700 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR23086//PTHR23086:SF43 - PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE // SUBFAMILY NOT NAMED Genomic Order:  313
Name:  ? Sobic.005G031700 Secondary Identifier:  ? PAC:37924043
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-6351 Sorghum bicolor pathologic  
Sbicolor PWY-6352 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.005G031700 0.5kb upstream 0.5kb upstream 4024 true Chr05: 2825369-2829392 Sorghum bicolor
Sobic.005G031700 0.5kb upstream 0.5kb upstream 500 false Chr05: 2828893-2829392 Sorghum bicolor
Sobic.005G031700 0.5kb downstream 0.5kb downstream 4024 true Chr05: 2824869-2828892 Sorghum bicolor
Sobic.005G031700 0.5kb downstream 0.5kb downstream 500 false Chr05: 2824869-2825368 Sorghum bicolor
Sobic.005G031700 1.0kb upstream 1.0kb upstream 4524 true Chr05: 2825369-2829892 Sorghum bicolor
Sobic.005G031700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 2828893-2829892 Sorghum bicolor
Sobic.005G031700 1.0kb downstream 1.0kb downstream 4524 true Chr05: 2824369-2828892 Sorghum bicolor
Sobic.005G031700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 2824369-2825368 Sorghum bicolor
Sobic.005G031700 2.0kb upstream 2.0kb upstream 5524 true Chr05: 2825369-2830892 Sorghum bicolor
Sobic.005G031700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 2828893-2830892 Sorghum bicolor
Sobic.005G031700 2.0kb downstream 2.0kb downstream 5524 true Chr05: 2823369-2828892 Sorghum bicolor
Sobic.005G031700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 2823369-2825368 Sorghum bicolor
Sobic.005G031700 5.0kb upstream 5.0kb upstream 8524 true Chr05: 2825369-2833892 Sorghum bicolor
Sobic.005G031700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 2828893-2833892 Sorghum bicolor
Sobic.005G031700 5.0kb downstream 5.0kb downstream 8524 true Chr05: 2820369-2828892 Sorghum bicolor
Sobic.005G031700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 2820369-2825368 Sorghum bicolor
Sobic.005G031700 10.0kb upstream 10.0kb upstream 13524 true Chr05: 2825369-2838892 Sorghum bicolor
Sobic.005G031700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 2828893-2838892 Sorghum bicolor
Sobic.005G031700 10.0kb downstream 10.0kb downstream 13524 true Chr05: 2815369-2828892 Sorghum bicolor
Sobic.005G031700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 2815369-2825368 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122199740 5267 Panicoideae View MSA
124586567 5269 Grass View MSA
122047903 5273 Angiosperm View MSA
121310813 5274 Embryophyte View MSA
123428791 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.034     Low  
cufflinks 0.004     Low Low
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.087        
cufflinks 0.151       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low  
cufflinks 0.079        
cufflinks 0.01     Low  
cufflinks 2.744       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.005     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.02     Low  
cufflinks 0.008     Low  
cufflinks 0.022     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.133       High

0 Strain