Gene : Sobic.005G033300 S. bicolor v3.1.1
Defline:  (1 of 1) K13110 - microfibrillar-associated protein 1 (MFAP1) Genomic Order:  329
Name:  ? Sobic.005G033300 Secondary Identifier:  ? PAC:37924002
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.005G033300 0.5kb upstream 0.5kb upstream 5356 true Chr05: 2967417-2972772 Sorghum bicolor
Sobic.005G033300 0.5kb upstream 0.5kb upstream 500 false Chr05: 2972273-2972772 Sorghum bicolor
Sobic.005G033300 0.5kb downstream 0.5kb downstream 5356 true Chr05: 2966917-2972272 Sorghum bicolor
Sobic.005G033300 0.5kb downstream 0.5kb downstream 500 false Chr05: 2966917-2967416 Sorghum bicolor
Sobic.005G033300 1.0kb upstream 1.0kb upstream 5856 true Chr05: 2967417-2973272 Sorghum bicolor
Sobic.005G033300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 2972273-2973272 Sorghum bicolor
Sobic.005G033300 1.0kb downstream 1.0kb downstream 5856 true Chr05: 2966417-2972272 Sorghum bicolor
Sobic.005G033300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 2966417-2967416 Sorghum bicolor
Sobic.005G033300 2.0kb upstream 2.0kb upstream 6856 true Chr05: 2967417-2974272 Sorghum bicolor
Sobic.005G033300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 2972273-2974272 Sorghum bicolor
Sobic.005G033300 2.0kb downstream 2.0kb downstream 6856 true Chr05: 2965417-2972272 Sorghum bicolor
Sobic.005G033300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 2965417-2967416 Sorghum bicolor
Sobic.005G033300 5.0kb upstream 5.0kb upstream 9856 true Chr05: 2967417-2977272 Sorghum bicolor
Sobic.005G033300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 2972273-2977272 Sorghum bicolor
Sobic.005G033300 5.0kb downstream 5.0kb downstream 9856 true Chr05: 2962417-2972272 Sorghum bicolor
Sobic.005G033300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 2962417-2967416 Sorghum bicolor
Sobic.005G033300 10.0kb upstream 10.0kb upstream 14856 true Chr05: 2967417-2982272 Sorghum bicolor
Sobic.005G033300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 2972273-2982272 Sorghum bicolor
Sobic.005G033300 10.0kb downstream 10.0kb downstream 14856 true Chr05: 2957417-2972272 Sorghum bicolor
Sobic.005G033300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 2957417-2967416 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122193085 5267 Panicoideae View MSA
124568719 5269 Grass View MSA
122047677 5273 Angiosperm View MSA
121344140 5274 Embryophyte View MSA
123423815 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.18     High High
cufflinks 4.359       Low
cufflinks 4.509       Low
cufflinks 5.604        
cufflinks 8.044        
cufflinks 4.907       Low
cufflinks 6.948        
cufflinks 3.992       Low
cufflinks 8.546        
cufflinks 8.709        
cufflinks 7.933        
cufflinks 9.831        
cufflinks 7.776        
cufflinks 10.901       High
cufflinks 7.806        
cufflinks 5.531        
cufflinks 7.098        
cufflinks 7.55        
cufflinks 10.655       High
cufflinks 8.523        
cufflinks 11.956       High
cufflinks 7.795        
cufflinks 9.763        
cufflinks 9.341        
cufflinks 5.971        
cufflinks 3.709       Low
cufflinks 6.693        
cufflinks 8.139        
cufflinks 5.072       Low
cufflinks 9.48        

0 Strain