Gene : Sobic.001G351400 S. bicolor v3.1.1
Defline:  (1 of 12) KOG1546 - Metacaspase involved in regulation of apoptosis Genomic Order:  3687
Name:  ? Sobic.001G351400 Secondary Identifier:  ? PAC:37938246
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G351400 0.5kb upstream 0.5kb upstream 2383 true Chr01: 64085670-64088052 Sorghum bicolor
Sobic.001G351400 0.5kb upstream 0.5kb upstream 500 false Chr01: 64085670-64086169 Sorghum bicolor
Sobic.001G351400 0.5kb downstream 0.5kb downstream 2383 true Chr01: 64086170-64088552 Sorghum bicolor
Sobic.001G351400 0.5kb downstream 0.5kb downstream 500 false Chr01: 64088053-64088552 Sorghum bicolor
Sobic.001G351400 1.0kb upstream 1.0kb upstream 2883 true Chr01: 64085170-64088052 Sorghum bicolor
Sobic.001G351400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 64085170-64086169 Sorghum bicolor
Sobic.001G351400 1.0kb downstream 1.0kb downstream 2883 true Chr01: 64086170-64089052 Sorghum bicolor
Sobic.001G351400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 64088053-64089052 Sorghum bicolor
Sobic.001G351400 2.0kb upstream 2.0kb upstream 3883 true Chr01: 64084170-64088052 Sorghum bicolor
Sobic.001G351400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 64084170-64086169 Sorghum bicolor
Sobic.001G351400 2.0kb downstream 2.0kb downstream 3883 true Chr01: 64086170-64090052 Sorghum bicolor
Sobic.001G351400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 64088053-64090052 Sorghum bicolor
Sobic.001G351400 5.0kb upstream 5.0kb upstream 6883 true Chr01: 64081170-64088052 Sorghum bicolor
Sobic.001G351400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 64081170-64086169 Sorghum bicolor
Sobic.001G351400 5.0kb downstream 5.0kb downstream 6883 true Chr01: 64086170-64093052 Sorghum bicolor
Sobic.001G351400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 64088053-64093052 Sorghum bicolor
Sobic.001G351400 10.0kb upstream 10.0kb upstream 11883 true Chr01: 64076170-64088052 Sorghum bicolor
Sobic.001G351400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 64076170-64086169 Sorghum bicolor
Sobic.001G351400 10.0kb downstream 10.0kb downstream 11883 true Chr01: 64086170-64098052 Sorghum bicolor
Sobic.001G351400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 64088053-64098052 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121994792 5273 Angiosperm View MSA
122181707 5267 Panicoideae View MSA
124585668 5269 Grass View MSA
123428899 5275 Viridiplantae View MSA
121265007 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.491        
cufflinks 63.831     High High
cufflinks 18.897     High  
cufflinks 42.51     High  
cufflinks 5.238        
cufflinks 73.864     High High
cufflinks 5.191        
cufflinks 16.887     High  
cufflinks 68.45     High High
cufflinks 97.592     High High
cufflinks 0.608        
cufflinks 1.618        
cufflinks 48.305     High  
cufflinks 1.315        
cufflinks 3.035        
cufflinks 60.004     High  
cufflinks 2.673        
cufflinks 3.531        
cufflinks 65.066     High High
cufflinks 3.204        
cufflinks 0.013     Low Low
cufflinks 3.34        
cufflinks 0.368       Low
cufflinks 0.17       Low
cufflinks 61.929     High High
cufflinks 68.469     High High
cufflinks 0.367       Low
cufflinks 0.693        
cufflinks 9.782        
cufflinks 3.419        

0 Strain