Gene : Sobic.001G350400 S. bicolor v3.1.1
Defline:  (1 of 1) 3.5.2.17 - Hydroxyisourate hydrolase / HIUHase Genomic Order:  3677
Name:  ? Sobic.001G350400 Secondary Identifier:  ? PAC:37940431
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-5691 Sorghum bicolor pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G350400 0.5kb upstream 0.5kb upstream 3811 true Chr01: 64009621-64013431 Sorghum bicolor
Sobic.001G350400 0.5kb upstream 0.5kb upstream 500 false Chr01: 64012932-64013431 Sorghum bicolor
Sobic.001G350400 0.5kb downstream 0.5kb downstream 3811 true Chr01: 64009121-64012931 Sorghum bicolor
Sobic.001G350400 0.5kb downstream 0.5kb downstream 500 false Chr01: 64009121-64009620 Sorghum bicolor
Sobic.001G350400 1.0kb upstream 1.0kb upstream 4311 true Chr01: 64009621-64013931 Sorghum bicolor
Sobic.001G350400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 64012932-64013931 Sorghum bicolor
Sobic.001G350400 1.0kb downstream 1.0kb downstream 4311 true Chr01: 64008621-64012931 Sorghum bicolor
Sobic.001G350400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 64008621-64009620 Sorghum bicolor
Sobic.001G350400 2.0kb upstream 2.0kb upstream 5311 true Chr01: 64009621-64014931 Sorghum bicolor
Sobic.001G350400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 64012932-64014931 Sorghum bicolor
Sobic.001G350400 2.0kb downstream 2.0kb downstream 5311 true Chr01: 64007621-64012931 Sorghum bicolor
Sobic.001G350400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 64007621-64009620 Sorghum bicolor
Sobic.001G350400 5.0kb upstream 5.0kb upstream 8311 true Chr01: 64009621-64017931 Sorghum bicolor
Sobic.001G350400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 64012932-64017931 Sorghum bicolor
Sobic.001G350400 5.0kb downstream 5.0kb downstream 8311 true Chr01: 64004621-64012931 Sorghum bicolor
Sobic.001G350400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 64004621-64009620 Sorghum bicolor
Sobic.001G350400 10.0kb upstream 10.0kb upstream 13311 true Chr01: 64009621-64022931 Sorghum bicolor
Sobic.001G350400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 64012932-64022931 Sorghum bicolor
Sobic.001G350400 10.0kb downstream 10.0kb downstream 13311 true Chr01: 63999621-64012931 Sorghum bicolor
Sobic.001G350400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 63999621-64009620 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178442 5267 Panicoideae View MSA
124577754 5269 Grass View MSA
122045927 5273 Angiosperm View MSA
121344098 5274 Embryophyte View MSA
123423784 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.276        
cufflinks 4.613       Low
cufflinks 4.604       Low
cufflinks 9.983        
cufflinks 9.236        
cufflinks 8.705        
cufflinks 12.044     High  
cufflinks 15.011     High  
cufflinks 22.275     High High
cufflinks 17.915     High  
cufflinks 18.54     High  
cufflinks 28.66     High High
cufflinks 17.137     High  
cufflinks 26.391     High High
cufflinks 12.569     High  
cufflinks 4.568       Low
cufflinks 11.344        
cufflinks 12.304     High  
cufflinks 6.921       Low
cufflinks 13.35     High  
cufflinks 12.514        
cufflinks 18.963     High  
cufflinks 23.532     High High
cufflinks 24.094     High High
cufflinks 7.852        
cufflinks 6.14       Low
cufflinks 21.556     High High
cufflinks 15.674     High  
cufflinks 18.785     High  
cufflinks 11.171        

0 Strain