Gene : Sobic.005G034500 S. bicolor v3.1.1
Defline:  (1 of 7) PF00069//PF13855 - Protein kinase domain (Pkinase) // Leucine rich repeat (LRR_8) Genomic Order:  340
Name:  ? Sobic.005G034500 Secondary Identifier:  ? PAC:37924177
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.005G034500 0.5kb upstream 0.5kb upstream 3463 true Chr05: 3102291-3105753 Sorghum bicolor
Sobic.005G034500 0.5kb upstream 0.5kb upstream 500 false Chr05: 3105254-3105753 Sorghum bicolor
Sobic.005G034500 0.5kb downstream 0.5kb downstream 3463 true Chr05: 3101791-3105253 Sorghum bicolor
Sobic.005G034500 0.5kb downstream 0.5kb downstream 500 false Chr05: 3101791-3102290 Sorghum bicolor
Sobic.005G034500 1.0kb upstream 1.0kb upstream 3963 true Chr05: 3102291-3106253 Sorghum bicolor
Sobic.005G034500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 3105254-3106253 Sorghum bicolor
Sobic.005G034500 1.0kb downstream 1.0kb downstream 3963 true Chr05: 3101291-3105253 Sorghum bicolor
Sobic.005G034500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 3101291-3102290 Sorghum bicolor
Sobic.005G034500 2.0kb upstream 2.0kb upstream 4963 true Chr05: 3102291-3107253 Sorghum bicolor
Sobic.005G034500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 3105254-3107253 Sorghum bicolor
Sobic.005G034500 2.0kb downstream 2.0kb downstream 4963 true Chr05: 3100291-3105253 Sorghum bicolor
Sobic.005G034500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 3100291-3102290 Sorghum bicolor
Sobic.005G034500 5.0kb upstream 5.0kb upstream 7963 true Chr05: 3102291-3110253 Sorghum bicolor
Sobic.005G034500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 3105254-3110253 Sorghum bicolor
Sobic.005G034500 5.0kb downstream 5.0kb downstream 7963 true Chr05: 3097291-3105253 Sorghum bicolor
Sobic.005G034500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 3097291-3102290 Sorghum bicolor
Sobic.005G034500 10.0kb upstream 10.0kb upstream 12963 true Chr05: 3102291-3115253 Sorghum bicolor
Sobic.005G034500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 3105254-3115253 Sorghum bicolor
Sobic.005G034500 10.0kb downstream 10.0kb downstream 12963 true Chr05: 3092291-3105253 Sorghum bicolor
Sobic.005G034500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 3092291-3102290 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180632 5267 Panicoideae View MSA
124589983 5269 Grass View MSA
122047752 5273 Angiosperm View MSA
121348254 5274 Embryophyte View MSA
123380793 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.87        
cufflinks 0.014     Low Low
cufflinks 0.005     Low Low
cufflinks 0.016     Low Low
cufflinks 2.682       High
cufflinks 0.177        
cufflinks 1.775       High
cufflinks 0.091        
cufflinks 0.011     Low Low
cufflinks 0.05     Low  
cufflinks 0.507        
cufflinks 0.463        
cufflinks 0.048     Low  
cufflinks 1.027        
cufflinks 0.312        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.131        
cufflinks 1.149        
cufflinks 0.025     Low Low
cufflinks 0.666        
cufflinks 5.271       High
cufflinks 1.595        
cufflinks 0.665        
cufflinks 0.424        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low Low
cufflinks 0.111        
cufflinks 0.092        
cufflinks 0.361        
cufflinks 1.171        

0 Strain