Gene : Sobic.001G341900 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR23423//PTHR23423:SF10 - ORGANIC SOLUTE TRANSPORTER-RELATED // TRANSMEMBRANE PROTEIN 184C Genomic Order:  3589
Name:  ? Sobic.001G341900 Secondary Identifier:  ? PAC:37944265
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G341900 0.5kb upstream 0.5kb upstream 4093 true Chr01: 62932885-62936977 Sorghum bicolor
Sobic.001G341900 0.5kb upstream 0.5kb upstream 500 false Chr01: 62936478-62936977 Sorghum bicolor
Sobic.001G341900 0.5kb downstream 0.5kb downstream 4093 true Chr01: 62932385-62936477 Sorghum bicolor
Sobic.001G341900 0.5kb downstream 0.5kb downstream 500 false Chr01: 62932385-62932884 Sorghum bicolor
Sobic.001G341900 1.0kb upstream 1.0kb upstream 4593 true Chr01: 62932885-62937477 Sorghum bicolor
Sobic.001G341900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 62936478-62937477 Sorghum bicolor
Sobic.001G341900 1.0kb downstream 1.0kb downstream 4593 true Chr01: 62931885-62936477 Sorghum bicolor
Sobic.001G341900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 62931885-62932884 Sorghum bicolor
Sobic.001G341900 2.0kb upstream 2.0kb upstream 5593 true Chr01: 62932885-62938477 Sorghum bicolor
Sobic.001G341900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 62936478-62938477 Sorghum bicolor
Sobic.001G341900 2.0kb downstream 2.0kb downstream 5593 true Chr01: 62930885-62936477 Sorghum bicolor
Sobic.001G341900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 62930885-62932884 Sorghum bicolor
Sobic.001G341900 5.0kb upstream 5.0kb upstream 8593 true Chr01: 62932885-62941477 Sorghum bicolor
Sobic.001G341900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 62936478-62941477 Sorghum bicolor
Sobic.001G341900 5.0kb downstream 5.0kb downstream 8593 true Chr01: 62927885-62936477 Sorghum bicolor
Sobic.001G341900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 62927885-62932884 Sorghum bicolor
Sobic.001G341900 10.0kb upstream 10.0kb upstream 13593 true Chr01: 62932885-62946477 Sorghum bicolor
Sobic.001G341900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 62936478-62946477 Sorghum bicolor
Sobic.001G341900 10.0kb downstream 10.0kb downstream 13593 true Chr01: 62922885-62936477 Sorghum bicolor
Sobic.001G341900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 62922885-62932884 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026542 5273 Angiosperm View MSA
122178663 5267 Panicoideae View MSA
124571464 5269 Grass View MSA
121296376 5274 Embryophyte View MSA
123427407 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.05     Low  
cufflinks 0.012     Low Low
cufflinks 0.012     Low Low
cufflinks 0.009     Low Low
cufflinks 0.047     Low  
cufflinks 0.02     Low  
cufflinks 0.045     Low  
cufflinks 0.018     Low  
cufflinks 0.011     Low Low
cufflinks 0.152        
cufflinks 0.201        
cufflinks 0.247        
cufflinks 0.072     Low  
cufflinks 0.233        
cufflinks 0.261       High
cufflinks 0.014     Low  
cufflinks 0.038     Low  
cufflinks 0.027     Low  
cufflinks 0.01     Low Low
cufflinks 0.04     Low  
cufflinks 0.395       High
cufflinks 0.342       High
cufflinks 0.277       High
cufflinks 0.205        
cufflinks 0.007     Low Low
cufflinks 0.007     Low Low
cufflinks 0.092     Low  
cufflinks 1.865       High
cufflinks 0.039     Low  
cufflinks 0.288       High

0 Strain