Gene : Sobic.005G040301 S. bicolor v3.1.1
Defline:  (1 of 3) PTHR31810:SF2 - METACASPASE-9 Genomic Order:  403
Name:  ? Sobic.005G040301 Secondary Identifier:  ? PAC:37924121
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.005G040301 0.5kb upstream 0.5kb upstream 969 true Chr05: 3641582-3642550 Sorghum bicolor
Sobic.005G040301 0.5kb upstream 0.5kb upstream 500 false Chr05: 3642051-3642550 Sorghum bicolor
Sobic.005G040301 0.5kb downstream 0.5kb downstream 969 true Chr05: 3641082-3642050 Sorghum bicolor
Sobic.005G040301 0.5kb downstream 0.5kb downstream 500 false Chr05: 3641082-3641581 Sorghum bicolor
Sobic.005G040301 1.0kb upstream 1.0kb upstream 1469 true Chr05: 3641582-3643050 Sorghum bicolor
Sobic.005G040301 1.0kb upstream 1.0kb upstream 1000 false Chr05: 3642051-3643050 Sorghum bicolor
Sobic.005G040301 1.0kb downstream 1.0kb downstream 1469 true Chr05: 3640582-3642050 Sorghum bicolor
Sobic.005G040301 1.0kb downstream 1.0kb downstream 1000 false Chr05: 3640582-3641581 Sorghum bicolor
Sobic.005G040301 2.0kb upstream 2.0kb upstream 2469 true Chr05: 3641582-3644050 Sorghum bicolor
Sobic.005G040301 2.0kb upstream 2.0kb upstream 2000 false Chr05: 3642051-3644050 Sorghum bicolor
Sobic.005G040301 2.0kb downstream 2.0kb downstream 2469 true Chr05: 3639582-3642050 Sorghum bicolor
Sobic.005G040301 2.0kb downstream 2.0kb downstream 2000 false Chr05: 3639582-3641581 Sorghum bicolor
Sobic.005G040301 5.0kb upstream 5.0kb upstream 5469 true Chr05: 3641582-3647050 Sorghum bicolor
Sobic.005G040301 5.0kb upstream 5.0kb upstream 5000 false Chr05: 3642051-3647050 Sorghum bicolor
Sobic.005G040301 5.0kb downstream 5.0kb downstream 5469 true Chr05: 3636582-3642050 Sorghum bicolor
Sobic.005G040301 5.0kb downstream 5.0kb downstream 5000 false Chr05: 3636582-3641581 Sorghum bicolor
Sobic.005G040301 10.0kb upstream 10.0kb upstream 10469 true Chr05: 3641582-3652050 Sorghum bicolor
Sobic.005G040301 10.0kb upstream 10.0kb upstream 10000 false Chr05: 3642051-3652050 Sorghum bicolor
Sobic.005G040301 10.0kb downstream 10.0kb downstream 10469 true Chr05: 3631582-3642050 Sorghum bicolor
Sobic.005G040301 10.0kb downstream 10.0kb downstream 10000 false Chr05: 3631582-3641581 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028307 5273 Angiosperm View MSA
122197832 5267 Panicoideae View MSA
124467484 5269 Grass View MSA
123428899 5275 Viridiplantae View MSA
121350269 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.022     Low  

0 Strain