Gene : Sobic.005G041100 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR22952:SF208 - BZIP TRANSCRIPTION FACTOR-LIKE PROTEIN Genomic Order:  411
Name:  ? Sobic.005G041100 Secondary Identifier:  ? PAC:37923754
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.005G041100 0.5kb upstream 0.5kb upstream 3024 true Chr05: 3769817-3772840 Sorghum bicolor
Sobic.005G041100 0.5kb upstream 0.5kb upstream 500 false Chr05: 3772341-3772840 Sorghum bicolor
Sobic.005G041100 0.5kb downstream 0.5kb downstream 3024 true Chr05: 3769317-3772340 Sorghum bicolor
Sobic.005G041100 0.5kb downstream 0.5kb downstream 500 false Chr05: 3769317-3769816 Sorghum bicolor
Sobic.005G041100 1.0kb upstream 1.0kb upstream 3524 true Chr05: 3769817-3773340 Sorghum bicolor
Sobic.005G041100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 3772341-3773340 Sorghum bicolor
Sobic.005G041100 1.0kb downstream 1.0kb downstream 3524 true Chr05: 3768817-3772340 Sorghum bicolor
Sobic.005G041100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 3768817-3769816 Sorghum bicolor
Sobic.005G041100 2.0kb upstream 2.0kb upstream 4524 true Chr05: 3769817-3774340 Sorghum bicolor
Sobic.005G041100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 3772341-3774340 Sorghum bicolor
Sobic.005G041100 2.0kb downstream 2.0kb downstream 4524 true Chr05: 3767817-3772340 Sorghum bicolor
Sobic.005G041100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 3767817-3769816 Sorghum bicolor
Sobic.005G041100 5.0kb upstream 5.0kb upstream 7524 true Chr05: 3769817-3777340 Sorghum bicolor
Sobic.005G041100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 3772341-3777340 Sorghum bicolor
Sobic.005G041100 5.0kb downstream 5.0kb downstream 7524 true Chr05: 3764817-3772340 Sorghum bicolor
Sobic.005G041100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 3764817-3769816 Sorghum bicolor
Sobic.005G041100 10.0kb upstream 10.0kb upstream 12524 true Chr05: 3769817-3782340 Sorghum bicolor
Sobic.005G041100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 3772341-3782340 Sorghum bicolor
Sobic.005G041100 10.0kb downstream 10.0kb downstream 12524 true Chr05: 3759817-3772340 Sorghum bicolor
Sobic.005G041100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 3759817-3769816 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176922 5267 Panicoideae View MSA
124580085 5269 Grass View MSA
122047006 5273 Angiosperm View MSA
121351169 5274 Embryophyte View MSA
123425858 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.91       High
cufflinks 0.005     Low Low
cufflinks 0.012     Low  
cufflinks 0.087        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.022     Low  
cufflinks 0.021     Low  
cufflinks 0.092        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low  
cufflinks 0.023     Low  
cufflinks 0.014     Low  
cufflinks 0.044     Low  
cufflinks 0.058     Low  
cufflinks 0.038     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.024     Low  
cufflinks 0.016     Low  
cufflinks 0.064     Low  
cufflinks 5.997       High
cufflinks 0.064     Low  
cufflinks 0.026     Low  

0 Strain