Gene : Sobic.001G335400 S. bicolor v3.1.1
Defline:  (1 of 4) PF16136 - Putative nuclear localisation signal (NINJA_B) Genomic Order:  3526
Name:  ? Sobic.001G335400 Secondary Identifier:  ? PAC:37939219
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G335400 0.5kb upstream 0.5kb upstream 5301 true Chr01: 62403207-62408507 Sorghum bicolor
Sobic.001G335400 0.5kb upstream 0.5kb upstream 500 false Chr01: 62408008-62408507 Sorghum bicolor
Sobic.001G335400 0.5kb downstream 0.5kb downstream 5301 true Chr01: 62402707-62408007 Sorghum bicolor
Sobic.001G335400 0.5kb downstream 0.5kb downstream 500 false Chr01: 62402707-62403206 Sorghum bicolor
Sobic.001G335400 1.0kb upstream 1.0kb upstream 5801 true Chr01: 62403207-62409007 Sorghum bicolor
Sobic.001G335400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 62408008-62409007 Sorghum bicolor
Sobic.001G335400 1.0kb downstream 1.0kb downstream 5801 true Chr01: 62402207-62408007 Sorghum bicolor
Sobic.001G335400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 62402207-62403206 Sorghum bicolor
Sobic.001G335400 2.0kb upstream 2.0kb upstream 6801 true Chr01: 62403207-62410007 Sorghum bicolor
Sobic.001G335400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 62408008-62410007 Sorghum bicolor
Sobic.001G335400 2.0kb downstream 2.0kb downstream 6801 true Chr01: 62401207-62408007 Sorghum bicolor
Sobic.001G335400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 62401207-62403206 Sorghum bicolor
Sobic.001G335400 5.0kb upstream 5.0kb upstream 9801 true Chr01: 62403207-62413007 Sorghum bicolor
Sobic.001G335400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 62408008-62413007 Sorghum bicolor
Sobic.001G335400 5.0kb downstream 5.0kb downstream 9801 true Chr01: 62398207-62408007 Sorghum bicolor
Sobic.001G335400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 62398207-62403206 Sorghum bicolor
Sobic.001G335400 10.0kb upstream 10.0kb upstream 14801 true Chr01: 62403207-62418007 Sorghum bicolor
Sobic.001G335400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 62408008-62418007 Sorghum bicolor
Sobic.001G335400 10.0kb downstream 10.0kb downstream 14801 true Chr01: 62393207-62408007 Sorghum bicolor
Sobic.001G335400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 62393207-62403206 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187233 5267 Panicoideae View MSA
124587117 5269 Grass View MSA
122050177 5273 Angiosperm View MSA
121311781 5274 Embryophyte View MSA
123349031 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.816        
cufflinks 2.438       Low
cufflinks 2.556       Low
cufflinks 2.706       Low
cufflinks 5.505        
cufflinks 10.899       High
cufflinks 3.869        
cufflinks 3.675        
cufflinks 5.856        
cufflinks 6.593        
cufflinks 4.908        
cufflinks 5.831        
cufflinks 11.97     High High
cufflinks 5.191        
cufflinks 6.555        
cufflinks 2.726       Low
cufflinks 2.805       Low
cufflinks 3.366        
cufflinks 4.334        
cufflinks 2.099       Low
cufflinks 6.8        
cufflinks 7.1        
cufflinks 4.48        
cufflinks 4.554        
cufflinks 5.892        
cufflinks 3.403        
cufflinks 3.683        
cufflinks 1.054       Low
cufflinks 5.928        
cufflinks 5.072        

0 Strain