Gene : Sobic.005G041000 S. bicolor v3.1.1
Defline:  (1 of 130) PF02365 - No apical meristem (NAM) protein (NAM) Genomic Order:  410
Name:  ? Sobic.005G041000 Secondary Identifier:  ? PAC:37923338
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.005G041000 0.5kb upstream 0.5kb upstream 2519 true Chr05: 3752410-3754928 Sorghum bicolor
Sobic.005G041000 0.5kb upstream 0.5kb upstream 500 false Chr05: 3752410-3752909 Sorghum bicolor
Sobic.005G041000 0.5kb downstream 0.5kb downstream 2519 true Chr05: 3752910-3755428 Sorghum bicolor
Sobic.005G041000 0.5kb downstream 0.5kb downstream 500 false Chr05: 3754929-3755428 Sorghum bicolor
Sobic.005G041000 1.0kb upstream 1.0kb upstream 3019 true Chr05: 3751910-3754928 Sorghum bicolor
Sobic.005G041000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 3751910-3752909 Sorghum bicolor
Sobic.005G041000 1.0kb downstream 1.0kb downstream 3019 true Chr05: 3752910-3755928 Sorghum bicolor
Sobic.005G041000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 3754929-3755928 Sorghum bicolor
Sobic.005G041000 2.0kb upstream 2.0kb upstream 4019 true Chr05: 3750910-3754928 Sorghum bicolor
Sobic.005G041000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 3750910-3752909 Sorghum bicolor
Sobic.005G041000 2.0kb downstream 2.0kb downstream 4019 true Chr05: 3752910-3756928 Sorghum bicolor
Sobic.005G041000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 3754929-3756928 Sorghum bicolor
Sobic.005G041000 5.0kb upstream 5.0kb upstream 7019 true Chr05: 3747910-3754928 Sorghum bicolor
Sobic.005G041000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 3747910-3752909 Sorghum bicolor
Sobic.005G041000 5.0kb downstream 5.0kb downstream 7019 true Chr05: 3752910-3759928 Sorghum bicolor
Sobic.005G041000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 3754929-3759928 Sorghum bicolor
Sobic.005G041000 10.0kb upstream 10.0kb upstream 12019 true Chr05: 3742910-3754928 Sorghum bicolor
Sobic.005G041000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 3742910-3752909 Sorghum bicolor
Sobic.005G041000 10.0kb downstream 10.0kb downstream 12019 true Chr05: 3752910-3764928 Sorghum bicolor
Sobic.005G041000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 3754929-3764928 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122198115 5267 Panicoideae View MSA
124580232 5269 Grass View MSA
122050248 5273 Angiosperm View MSA
121311822 5274 Embryophyte View MSA
123349064 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.01     Low Low
cufflinks 0.012     Low Low
cufflinks 0.26       High
cufflinks 0.183        
cufflinks 0.012     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.078     Low  
cufflinks 0.041     Low  
cufflinks 0.084        
cufflinks 0.159        
cufflinks 0.009     Low Low
cufflinks 0.049     Low  
cufflinks 0.102        
cufflinks 0.016     Low  
cufflinks 0.035     Low  
cufflinks 0.205       High
cufflinks 0.078     Low  
cufflinks 0.049     Low  
cufflinks 0.076     Low  
cufflinks 0.192        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low Low
cufflinks 0.015     Low  
cufflinks 0.008     Low Low
cufflinks 0.227       High
cufflinks 0.018     Low  
cufflinks 0.033     Low  
cufflinks 0.331       High
cufflinks 0.008     Low Low
cufflinks 0.384       High

0 Strain