Gene : Sobic.001G339600 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR11040//PTHR11040:SF23 - ZINC/IRON TRANSPORTER // SUBFAMILY NOT NAMED Genomic Order:  3565
Name:  ? Sobic.001G339600 Secondary Identifier:  ? PAC:37943331
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G339600 0.5kb upstream 0.5kb upstream 3976 true Chr01: 62734881-62738856 Sorghum bicolor
Sobic.001G339600 0.5kb upstream 0.5kb upstream 500 false Chr01: 62734881-62735380 Sorghum bicolor
Sobic.001G339600 0.5kb downstream 0.5kb downstream 3976 true Chr01: 62735381-62739356 Sorghum bicolor
Sobic.001G339600 0.5kb downstream 0.5kb downstream 500 false Chr01: 62738857-62739356 Sorghum bicolor
Sobic.001G339600 1.0kb upstream 1.0kb upstream 4476 true Chr01: 62734381-62738856 Sorghum bicolor
Sobic.001G339600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 62734381-62735380 Sorghum bicolor
Sobic.001G339600 1.0kb downstream 1.0kb downstream 4476 true Chr01: 62735381-62739856 Sorghum bicolor
Sobic.001G339600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 62738857-62739856 Sorghum bicolor
Sobic.001G339600 2.0kb upstream 2.0kb upstream 5476 true Chr01: 62733381-62738856 Sorghum bicolor
Sobic.001G339600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 62733381-62735380 Sorghum bicolor
Sobic.001G339600 2.0kb downstream 2.0kb downstream 5476 true Chr01: 62735381-62740856 Sorghum bicolor
Sobic.001G339600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 62738857-62740856 Sorghum bicolor
Sobic.001G339600 5.0kb upstream 5.0kb upstream 8476 true Chr01: 62730381-62738856 Sorghum bicolor
Sobic.001G339600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 62730381-62735380 Sorghum bicolor
Sobic.001G339600 5.0kb downstream 5.0kb downstream 8476 true Chr01: 62735381-62743856 Sorghum bicolor
Sobic.001G339600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 62738857-62743856 Sorghum bicolor
Sobic.001G339600 10.0kb upstream 10.0kb upstream 13476 true Chr01: 62725381-62738856 Sorghum bicolor
Sobic.001G339600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 62725381-62735380 Sorghum bicolor
Sobic.001G339600 10.0kb downstream 10.0kb downstream 13476 true Chr01: 62735381-62748856 Sorghum bicolor
Sobic.001G339600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 62738857-62748856 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187406 5267 Panicoideae View MSA
124579067 5269 Grass View MSA
122044792 5273 Angiosperm View MSA
121349012 5274 Embryophyte View MSA
123428132 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.201       Low
cufflinks 1.417        
cufflinks 3.769        
cufflinks 10.856       High
cufflinks 0.521       Low
cufflinks 4.477        
cufflinks 4.18        
cufflinks 1.927        
cufflinks 4.469        
cufflinks 1.778        
cufflinks 3.91        
cufflinks 4.89        
cufflinks 2.374        
cufflinks 3.207        
cufflinks 0.953        
cufflinks 1.669        
cufflinks 2.919        
cufflinks 2.697        
cufflinks 5.209        
cufflinks 2.198        
cufflinks 0.157       Low
cufflinks 1.508        
cufflinks 4.115        
cufflinks 3.724        
cufflinks 3.12        
cufflinks 1.038        
cufflinks 4.218        
cufflinks 0.052     Low Low
cufflinks 1.313        
cufflinks 1.568        

0 Strain