Gene : Sobic.001G332000 S. bicolor v3.1.1
Defline:  (1 of 91) PF01357 - Pollen allergen (Pollen_allerg_1) Genomic Order:  3490
Name:  ? Sobic.001G332000 Secondary Identifier:  ? PAC:37940617
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G332000 0.5kb upstream 0.5kb upstream 1233 true Chr01: 62067492-62068724 Sorghum bicolor
Sobic.001G332000 0.5kb upstream 0.5kb upstream 500 false Chr01: 62068225-62068724 Sorghum bicolor
Sobic.001G332000 0.5kb downstream 0.5kb downstream 1233 true Chr01: 62066992-62068224 Sorghum bicolor
Sobic.001G332000 0.5kb downstream 0.5kb downstream 500 false Chr01: 62066992-62067491 Sorghum bicolor
Sobic.001G332000 1.0kb upstream 1.0kb upstream 1733 true Chr01: 62067492-62069224 Sorghum bicolor
Sobic.001G332000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 62068225-62069224 Sorghum bicolor
Sobic.001G332000 1.0kb downstream 1.0kb downstream 1733 true Chr01: 62066492-62068224 Sorghum bicolor
Sobic.001G332000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 62066492-62067491 Sorghum bicolor
Sobic.001G332000 2.0kb upstream 2.0kb upstream 2733 true Chr01: 62067492-62070224 Sorghum bicolor
Sobic.001G332000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 62068225-62070224 Sorghum bicolor
Sobic.001G332000 2.0kb downstream 2.0kb downstream 2733 true Chr01: 62065492-62068224 Sorghum bicolor
Sobic.001G332000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 62065492-62067491 Sorghum bicolor
Sobic.001G332000 5.0kb upstream 5.0kb upstream 5733 true Chr01: 62067492-62073224 Sorghum bicolor
Sobic.001G332000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 62068225-62073224 Sorghum bicolor
Sobic.001G332000 5.0kb downstream 5.0kb downstream 5733 true Chr01: 62062492-62068224 Sorghum bicolor
Sobic.001G332000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 62062492-62067491 Sorghum bicolor
Sobic.001G332000 10.0kb upstream 10.0kb upstream 10733 true Chr01: 62067492-62078224 Sorghum bicolor
Sobic.001G332000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 62068225-62078224 Sorghum bicolor
Sobic.001G332000 10.0kb downstream 10.0kb downstream 10733 true Chr01: 62057492-62068224 Sorghum bicolor
Sobic.001G332000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 62057492-62067491 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121996156 5273 Angiosperm View MSA
122199224 5267 Panicoideae View MSA
124590797 5269 Grass View MSA
121266324 5274 Embryophyte View MSA
123304666 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.051     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.318       High
cufflinks 0.403        
cufflinks 0.022     Low  
cufflinks 0.262        
cufflinks 0.213        
cufflinks 0.154        
cufflinks 0.025     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.022     Low  
cufflinks 0.06     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.127        
cufflinks 626.396     High High
cufflinks 0.044     Low  
cufflinks 0.199        
cufflinks 0.192        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.158        
cufflinks 0.077     Low  
cufflinks 0.032     Low  
cufflinks 0.02     Low  
cufflinks 0.082     Low  
cufflinks 0.022     Low  
cufflinks 0.033     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.062     Low  
cufflinks 0.219        
cufflinks 10.009       High

0 Strain