Gene : Sobic.001G326900 S. bicolor v3.1.1
Defline:  (1 of 2) 2.7.9.1 - Pyruvate, phosphate dikinase / Pyruvate,phosphate dikinase Genomic Order:  3440
Name:  ? Sobic.001G326900 Secondary Identifier:  ? PAC:37945301
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-241 Sorghum bicolor pathologic  
Sbicolor PWY-6549 Sorghum bicolor pathologic  
Sbicolor PWY-7115 Sorghum bicolor pathologic  
Sbicolor PWY-7117 Sorghum bicolor pathologic  

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G326900 0.5kb upstream 0.5kb upstream 8895 true Chr01: 61372102-61380996 Sorghum bicolor
Sobic.001G326900 0.5kb upstream 0.5kb upstream 500 false Chr01: 61372102-61372601 Sorghum bicolor
Sobic.001G326900 0.5kb downstream 0.5kb downstream 8895 true Chr01: 61372602-61381496 Sorghum bicolor
Sobic.001G326900 0.5kb downstream 0.5kb downstream 500 false Chr01: 61380997-61381496 Sorghum bicolor
Sobic.001G326900 1.0kb upstream 1.0kb upstream 9395 true Chr01: 61371602-61380996 Sorghum bicolor
Sobic.001G326900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 61371602-61372601 Sorghum bicolor
Sobic.001G326900 1.0kb downstream 1.0kb downstream 9395 true Chr01: 61372602-61381996 Sorghum bicolor
Sobic.001G326900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 61380997-61381996 Sorghum bicolor
Sobic.001G326900 2.0kb upstream 2.0kb upstream 10395 true Chr01: 61370602-61380996 Sorghum bicolor
Sobic.001G326900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 61370602-61372601 Sorghum bicolor
Sobic.001G326900 2.0kb downstream 2.0kb downstream 10395 true Chr01: 61372602-61382996 Sorghum bicolor
Sobic.001G326900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 61380997-61382996 Sorghum bicolor
Sobic.001G326900 5.0kb upstream 5.0kb upstream 13395 true Chr01: 61367602-61380996 Sorghum bicolor
Sobic.001G326900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 61367602-61372601 Sorghum bicolor
Sobic.001G326900 5.0kb downstream 5.0kb downstream 13395 true Chr01: 61372602-61385996 Sorghum bicolor
Sobic.001G326900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 61380997-61385996 Sorghum bicolor
Sobic.001G326900 10.0kb upstream 10.0kb upstream 18395 true Chr01: 61362602-61380996 Sorghum bicolor
Sobic.001G326900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 61362602-61372601 Sorghum bicolor
Sobic.001G326900 10.0kb downstream 10.0kb downstream 18395 true Chr01: 61372602-61390996 Sorghum bicolor
Sobic.001G326900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 61380997-61390996 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191982 5267 Panicoideae View MSA
124580317 5269 Grass View MSA
122045986 5273 Angiosperm View MSA
121345134 5274 Embryophyte View MSA
123425418 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.788        
cufflinks 0.457        
cufflinks 0.719        
cufflinks 0.54        
cufflinks 1.493       High
cufflinks 0.914        
cufflinks 0.531        
cufflinks 0.334       Low
cufflinks 0.897        
cufflinks 1.051        
cufflinks 0.521        
cufflinks 0.575        
cufflinks 1.065        
cufflinks 4.13       High
cufflinks 1.247        
cufflinks 0.573        
cufflinks 0.486        
cufflinks 0.535        
cufflinks 0.501        
cufflinks 0.542        
cufflinks 2.514       High
cufflinks 0.577        
cufflinks 0.44        
cufflinks 0.43       Low
cufflinks 0.688        
cufflinks 0.48        
cufflinks 0.853        
cufflinks 2.431       High
cufflinks 0.373       Low
cufflinks 1.083        

0 Strain