Gene : Sobic.001G324900 S. bicolor v3.1.1
Defline:  (1 of 2) PF10225 - Uncharacterized conserved protein (DUF2215) (DUF2215) Genomic Order:  3422
Name:  ? Sobic.001G324900 Secondary Identifier:  ? PAC:37940397
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G324900 0.5kb upstream 0.5kb upstream 5400 true Chr01: 61206656-61212055 Sorghum bicolor
Sobic.001G324900 0.5kb upstream 0.5kb upstream 500 false Chr01: 61206656-61207155 Sorghum bicolor
Sobic.001G324900 0.5kb downstream 0.5kb downstream 5400 true Chr01: 61207156-61212555 Sorghum bicolor
Sobic.001G324900 0.5kb downstream 0.5kb downstream 500 false Chr01: 61212056-61212555 Sorghum bicolor
Sobic.001G324900 1.0kb upstream 1.0kb upstream 5900 true Chr01: 61206156-61212055 Sorghum bicolor
Sobic.001G324900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 61206156-61207155 Sorghum bicolor
Sobic.001G324900 1.0kb downstream 1.0kb downstream 5900 true Chr01: 61207156-61213055 Sorghum bicolor
Sobic.001G324900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 61212056-61213055 Sorghum bicolor
Sobic.001G324900 2.0kb upstream 2.0kb upstream 6900 true Chr01: 61205156-61212055 Sorghum bicolor
Sobic.001G324900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 61205156-61207155 Sorghum bicolor
Sobic.001G324900 2.0kb downstream 2.0kb downstream 6900 true Chr01: 61207156-61214055 Sorghum bicolor
Sobic.001G324900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 61212056-61214055 Sorghum bicolor
Sobic.001G324900 5.0kb upstream 5.0kb upstream 9900 true Chr01: 61202156-61212055 Sorghum bicolor
Sobic.001G324900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 61202156-61207155 Sorghum bicolor
Sobic.001G324900 5.0kb downstream 5.0kb downstream 9900 true Chr01: 61207156-61217055 Sorghum bicolor
Sobic.001G324900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 61212056-61217055 Sorghum bicolor
Sobic.001G324900 10.0kb upstream 10.0kb upstream 14900 true Chr01: 61197156-61212055 Sorghum bicolor
Sobic.001G324900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 61197156-61207155 Sorghum bicolor
Sobic.001G324900 10.0kb downstream 10.0kb downstream 14900 true Chr01: 61207156-61222055 Sorghum bicolor
Sobic.001G324900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 61212056-61222055 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175599 5267 Panicoideae View MSA
124579470 5269 Grass View MSA
122042001 5273 Angiosperm View MSA
121348772 5274 Embryophyte View MSA
123381008 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.243        
cufflinks 2.126       Low
cufflinks 16.631     High High
cufflinks 16.848     High High
cufflinks 6.15        
cufflinks 3.86        
cufflinks 2.976        
cufflinks 1.629       Low
cufflinks 4.518        
cufflinks 5.534        
cufflinks 3.478        
cufflinks 3.224        
cufflinks 4.898        
cufflinks 2.956        
cufflinks 14.753     High High
cufflinks 2.79        
cufflinks 2.908        
cufflinks 2.98        
cufflinks 5.462        
cufflinks 2.92        
cufflinks 5.724        
cufflinks 2.6        
cufflinks 3.175        
cufflinks 2.989        
cufflinks 2.72        
cufflinks 1.638       Low
cufflinks 13.347     High High
cufflinks 4.76        
cufflinks 1.995       Low
cufflinks 10.516       High

0 Strain