Gene : Sobic.001G307900 S. bicolor v3.1.1
Defline:  (1 of 1) K18167 - succinate dehydrogenase assembly factor 1 (SDHAF1) Genomic Order:  3239
Name:  ? Sobic.001G307900 Secondary Identifier:  ? PAC:37944326
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G307900 0.5kb upstream 0.5kb upstream 4157 true Chr01: 59336133-59340289 Sorghum bicolor
Sobic.001G307900 0.5kb upstream 0.5kb upstream 500 false Chr01: 59339790-59340289 Sorghum bicolor
Sobic.001G307900 0.5kb downstream 0.5kb downstream 4157 true Chr01: 59335633-59339789 Sorghum bicolor
Sobic.001G307900 0.5kb downstream 0.5kb downstream 500 false Chr01: 59335633-59336132 Sorghum bicolor
Sobic.001G307900 1.0kb upstream 1.0kb upstream 4657 true Chr01: 59336133-59340789 Sorghum bicolor
Sobic.001G307900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 59339790-59340789 Sorghum bicolor
Sobic.001G307900 1.0kb downstream 1.0kb downstream 4657 true Chr01: 59335133-59339789 Sorghum bicolor
Sobic.001G307900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 59335133-59336132 Sorghum bicolor
Sobic.001G307900 2.0kb upstream 2.0kb upstream 5657 true Chr01: 59336133-59341789 Sorghum bicolor
Sobic.001G307900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 59339790-59341789 Sorghum bicolor
Sobic.001G307900 2.0kb downstream 2.0kb downstream 5657 true Chr01: 59334133-59339789 Sorghum bicolor
Sobic.001G307900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 59334133-59336132 Sorghum bicolor
Sobic.001G307900 5.0kb upstream 5.0kb upstream 8657 true Chr01: 59336133-59344789 Sorghum bicolor
Sobic.001G307900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 59339790-59344789 Sorghum bicolor
Sobic.001G307900 5.0kb downstream 5.0kb downstream 8657 true Chr01: 59331133-59339789 Sorghum bicolor
Sobic.001G307900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 59331133-59336132 Sorghum bicolor
Sobic.001G307900 10.0kb upstream 10.0kb upstream 13657 true Chr01: 59336133-59349789 Sorghum bicolor
Sobic.001G307900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 59339790-59349789 Sorghum bicolor
Sobic.001G307900 10.0kb downstream 10.0kb downstream 13657 true Chr01: 59326133-59339789 Sorghum bicolor
Sobic.001G307900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 59326133-59336132 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122193093 5267 Panicoideae View MSA
124590098 5269 Grass View MSA
122045056 5273 Angiosperm View MSA
121351084 5274 Embryophyte View MSA
123425666 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.737       High
cufflinks 0.853        
cufflinks 0.938        
cufflinks 1.086        
cufflinks 0.915        
cufflinks 2.007       High
cufflinks 0.922        
cufflinks 0.603       Low
cufflinks 1.019        
cufflinks 1.258        
cufflinks 0.757        
cufflinks 0.778        
cufflinks 1.233        
cufflinks 0.872        
cufflinks 1.487       High
cufflinks 1.198        
cufflinks 1.138        
cufflinks 1.003        
cufflinks 0.612       Low
cufflinks 1.233        
cufflinks 1.176        
cufflinks 0.858        
cufflinks 0.945        
cufflinks 0.902        
cufflinks 0.656       Low
cufflinks 0.601       Low
cufflinks 0.788        
cufflinks 0.88        
cufflinks 0.89        
cufflinks 1.456       High

0 Strain