Gene : Sobic.001G306900 S. bicolor v3.1.1
Defline:  (1 of 1) K12600 - superkiller protein 3 (SKI3, TTC37) Genomic Order:  3228
Name:  ? Sobic.001G306900 Secondary Identifier:  ? PAC:37939613
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G306900 0.5kb upstream 0.5kb upstream 8693 true Chr01: 59157931-59166623 Sorghum bicolor
Sobic.001G306900 0.5kb upstream 0.5kb upstream 500 false Chr01: 59157931-59158430 Sorghum bicolor
Sobic.001G306900 0.5kb downstream 0.5kb downstream 8693 true Chr01: 59158431-59167123 Sorghum bicolor
Sobic.001G306900 0.5kb downstream 0.5kb downstream 500 false Chr01: 59166624-59167123 Sorghum bicolor
Sobic.001G306900 1.0kb upstream 1.0kb upstream 9193 true Chr01: 59157431-59166623 Sorghum bicolor
Sobic.001G306900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 59157431-59158430 Sorghum bicolor
Sobic.001G306900 1.0kb downstream 1.0kb downstream 9193 true Chr01: 59158431-59167623 Sorghum bicolor
Sobic.001G306900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 59166624-59167623 Sorghum bicolor
Sobic.001G306900 2.0kb upstream 2.0kb upstream 10193 true Chr01: 59156431-59166623 Sorghum bicolor
Sobic.001G306900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 59156431-59158430 Sorghum bicolor
Sobic.001G306900 2.0kb downstream 2.0kb downstream 10193 true Chr01: 59158431-59168623 Sorghum bicolor
Sobic.001G306900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 59166624-59168623 Sorghum bicolor
Sobic.001G306900 5.0kb upstream 5.0kb upstream 13193 true Chr01: 59153431-59166623 Sorghum bicolor
Sobic.001G306900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 59153431-59158430 Sorghum bicolor
Sobic.001G306900 5.0kb downstream 5.0kb downstream 13193 true Chr01: 59158431-59171623 Sorghum bicolor
Sobic.001G306900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 59166624-59171623 Sorghum bicolor
Sobic.001G306900 10.0kb upstream 10.0kb upstream 18193 true Chr01: 59148431-59166623 Sorghum bicolor
Sobic.001G306900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 59148431-59158430 Sorghum bicolor
Sobic.001G306900 10.0kb downstream 10.0kb downstream 18193 true Chr01: 59158431-59176623 Sorghum bicolor
Sobic.001G306900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 59166624-59176623 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186062 5267 Panicoideae View MSA
124582618 5269 Grass View MSA
122046967 5273 Angiosperm View MSA
121344761 5274 Embryophyte View MSA
123425993 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.212       Low
cufflinks 0.976       Low
cufflinks 2.206        
cufflinks 2.478        
cufflinks 7.615       High
cufflinks 4.196        
cufflinks 2.954        
cufflinks 1.969        
cufflinks 7.035       High
cufflinks 7.373       High
cufflinks 3.648        
cufflinks 3.893        
cufflinks 5.914       High
cufflinks 2.715        
cufflinks 4.922        
cufflinks 1.587       Low
cufflinks 2.59        
cufflinks 2.544        
cufflinks 2.297        
cufflinks 2.844        
cufflinks 12.171       High
cufflinks 3.283        
cufflinks 2.661        
cufflinks 2.993        
cufflinks 2.317        
cufflinks 1.424       Low
cufflinks 3.976        
cufflinks 3.424        
cufflinks 2.761        
cufflinks 5.98       High

0 Strain