Gene : Sobic.001G302300 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR31807//PTHR31807:SF10 - FAMILY NOT NAMED // QWRF MOTIF-CONTAINING PROTEIN 7 Genomic Order:  3180
Name:  ? Sobic.001G302300 Secondary Identifier:  ? PAC:37939879
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G302300 0.5kb upstream 0.5kb upstream 2939 true Chr01: 58489342-58492280 Sorghum bicolor
Sobic.001G302300 0.5kb upstream 0.5kb upstream 500 false Chr01: 58489342-58489841 Sorghum bicolor
Sobic.001G302300 0.5kb downstream 0.5kb downstream 2939 true Chr01: 58489842-58492780 Sorghum bicolor
Sobic.001G302300 0.5kb downstream 0.5kb downstream 500 false Chr01: 58492281-58492780 Sorghum bicolor
Sobic.001G302300 1.0kb upstream 1.0kb upstream 3439 true Chr01: 58488842-58492280 Sorghum bicolor
Sobic.001G302300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 58488842-58489841 Sorghum bicolor
Sobic.001G302300 1.0kb downstream 1.0kb downstream 3439 true Chr01: 58489842-58493280 Sorghum bicolor
Sobic.001G302300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 58492281-58493280 Sorghum bicolor
Sobic.001G302300 2.0kb upstream 2.0kb upstream 4439 true Chr01: 58487842-58492280 Sorghum bicolor
Sobic.001G302300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 58487842-58489841 Sorghum bicolor
Sobic.001G302300 2.0kb downstream 2.0kb downstream 4439 true Chr01: 58489842-58494280 Sorghum bicolor
Sobic.001G302300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 58492281-58494280 Sorghum bicolor
Sobic.001G302300 5.0kb upstream 5.0kb upstream 7439 true Chr01: 58484842-58492280 Sorghum bicolor
Sobic.001G302300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 58484842-58489841 Sorghum bicolor
Sobic.001G302300 5.0kb downstream 5.0kb downstream 7439 true Chr01: 58489842-58497280 Sorghum bicolor
Sobic.001G302300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 58492281-58497280 Sorghum bicolor
Sobic.001G302300 10.0kb upstream 10.0kb upstream 12439 true Chr01: 58479842-58492280 Sorghum bicolor
Sobic.001G302300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 58479842-58489841 Sorghum bicolor
Sobic.001G302300 10.0kb downstream 10.0kb downstream 12439 true Chr01: 58489842-58502280 Sorghum bicolor
Sobic.001G302300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 58492281-58502280 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175568 5267 Panicoideae View MSA
124579439 5269 Grass View MSA
122044458 5273 Angiosperm View MSA
121348675 5274 Embryophyte View MSA
123426167 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.052     Low Low
cufflinks 0.416        
cufflinks 0.031     Low Low
cufflinks 0.013     Low Low
cufflinks 0.055     Low Low
cufflinks 0.121        
cufflinks 1.931        
cufflinks 4.649        
cufflinks 0.118        
cufflinks 0.056     Low Low
cufflinks 4.671        
cufflinks 4.628        
cufflinks 5.937       High
cufflinks 2.815        
cufflinks 2.344        
cufflinks 0.178        
cufflinks 1.982        
cufflinks 1.674        
cufflinks 0.936        
cufflinks 1.857        
cufflinks 0.015     Low Low
cufflinks 1.323        
cufflinks 2.372        
cufflinks 2.445        
cufflinks 1.135        
cufflinks 1.114        
cufflinks 3.012        
cufflinks 0.005     Low Low
cufflinks 5.094       High
cufflinks 1.219        

0 Strain