Gene : Sobic.005G064000 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR12802:SF41 - BRAHMA ASSOCIATED PROTEIN 155 KDA Genomic Order:  638
Name:  ? Sobic.005G064000 Secondary Identifier:  ? PAC:37923200
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.005G064000 0.5kb upstream 0.5kb upstream 5564 true Chr05: 7021660-7027223 Sorghum bicolor
Sobic.005G064000 0.5kb upstream 0.5kb upstream 500 false Chr05: 7021660-7022159 Sorghum bicolor
Sobic.005G064000 0.5kb downstream 0.5kb downstream 5564 true Chr05: 7022160-7027723 Sorghum bicolor
Sobic.005G064000 0.5kb downstream 0.5kb downstream 500 false Chr05: 7027224-7027723 Sorghum bicolor
Sobic.005G064000 1.0kb upstream 1.0kb upstream 6064 true Chr05: 7021160-7027223 Sorghum bicolor
Sobic.005G064000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 7021160-7022159 Sorghum bicolor
Sobic.005G064000 1.0kb downstream 1.0kb downstream 6064 true Chr05: 7022160-7028223 Sorghum bicolor
Sobic.005G064000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 7027224-7028223 Sorghum bicolor
Sobic.005G064000 2.0kb upstream 2.0kb upstream 7064 true Chr05: 7020160-7027223 Sorghum bicolor
Sobic.005G064000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 7020160-7022159 Sorghum bicolor
Sobic.005G064000 2.0kb downstream 2.0kb downstream 7064 true Chr05: 7022160-7029223 Sorghum bicolor
Sobic.005G064000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 7027224-7029223 Sorghum bicolor
Sobic.005G064000 5.0kb upstream 5.0kb upstream 10064 true Chr05: 7017160-7027223 Sorghum bicolor
Sobic.005G064000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 7017160-7022159 Sorghum bicolor
Sobic.005G064000 5.0kb downstream 5.0kb downstream 10064 true Chr05: 7022160-7032223 Sorghum bicolor
Sobic.005G064000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 7027224-7032223 Sorghum bicolor
Sobic.005G064000 10.0kb upstream 10.0kb upstream 15064 true Chr05: 7012160-7027223 Sorghum bicolor
Sobic.005G064000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 7012160-7022159 Sorghum bicolor
Sobic.005G064000 10.0kb downstream 10.0kb downstream 15064 true Chr05: 7022160-7037223 Sorghum bicolor
Sobic.005G064000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 7027224-7037223 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182139 5267 Panicoideae View MSA
124583035 5269 Grass View MSA
122042836 5273 Angiosperm View MSA
121349137 5274 Embryophyte View MSA
123428437 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.896        
cufflinks 2.849       Low
cufflinks 2.592       Low
cufflinks 2.968       Low
cufflinks 6.167       High
cufflinks 3.737        
cufflinks 4.604        
cufflinks 2.858       Low
cufflinks 5.679        
cufflinks 6.026       High
cufflinks 4.516        
cufflinks 6.304       High
cufflinks 4.93        
cufflinks 4.692        
cufflinks 4.545        
cufflinks 3.368        
cufflinks 4.515        
cufflinks 4.906        
cufflinks 5.389        
cufflinks 5.488        
cufflinks 7.488       High
cufflinks 4.431        
cufflinks 5.127        
cufflinks 5.198        
cufflinks 4.501        
cufflinks 2.797       Low
cufflinks 4.527        
cufflinks 3.328        
cufflinks 4.149        
cufflinks 4.933        

0 Strain