Gene : Sobic.001G295500 S. bicolor v3.1.1
Defline:  similar to Expressed protein Genomic Order:  3108
Name:  ? Sobic.001G295500 Secondary Identifier:  ? PAC:37940091
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G295500 0.5kb upstream 0.5kb upstream 4989 true Chr01: 57388606-57393594 Sorghum bicolor
Sobic.001G295500 0.5kb upstream 0.5kb upstream 500 false Chr01: 57393095-57393594 Sorghum bicolor
Sobic.001G295500 0.5kb downstream 0.5kb downstream 4989 true Chr01: 57388106-57393094 Sorghum bicolor
Sobic.001G295500 0.5kb downstream 0.5kb downstream 500 false Chr01: 57388106-57388605 Sorghum bicolor
Sobic.001G295500 1.0kb upstream 1.0kb upstream 5489 true Chr01: 57388606-57394094 Sorghum bicolor
Sobic.001G295500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 57393095-57394094 Sorghum bicolor
Sobic.001G295500 1.0kb downstream 1.0kb downstream 5489 true Chr01: 57387606-57393094 Sorghum bicolor
Sobic.001G295500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 57387606-57388605 Sorghum bicolor
Sobic.001G295500 2.0kb upstream 2.0kb upstream 6489 true Chr01: 57388606-57395094 Sorghum bicolor
Sobic.001G295500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 57393095-57395094 Sorghum bicolor
Sobic.001G295500 2.0kb downstream 2.0kb downstream 6489 true Chr01: 57386606-57393094 Sorghum bicolor
Sobic.001G295500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 57386606-57388605 Sorghum bicolor
Sobic.001G295500 5.0kb upstream 5.0kb upstream 9489 true Chr01: 57388606-57398094 Sorghum bicolor
Sobic.001G295500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 57393095-57398094 Sorghum bicolor
Sobic.001G295500 5.0kb downstream 5.0kb downstream 9489 true Chr01: 57383606-57393094 Sorghum bicolor
Sobic.001G295500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 57383606-57388605 Sorghum bicolor
Sobic.001G295500 10.0kb upstream 10.0kb upstream 14489 true Chr01: 57388606-57403094 Sorghum bicolor
Sobic.001G295500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 57393095-57403094 Sorghum bicolor
Sobic.001G295500 10.0kb downstream 10.0kb downstream 14489 true Chr01: 57378606-57393094 Sorghum bicolor
Sobic.001G295500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 57378606-57388605 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041519 5273 Angiosperm View MSA
122188450 5267 Panicoideae View MSA
124588605 5269 Grass View MSA
121351305 5274 Embryophyte View MSA
123426139 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.147        
cufflinks 0.598       Low
cufflinks 1.185        
cufflinks 1.104        
cufflinks 1.289        
cufflinks 1.378       High
cufflinks 0.955        
cufflinks 0.928        
cufflinks 1.445       High
cufflinks 0.768        
cufflinks 0.66        
cufflinks 0.822        
cufflinks 0.685        
cufflinks 0.861        
cufflinks 0.988        
cufflinks 1.383       High
cufflinks 0.707        
cufflinks 1.084        
cufflinks 0.933        
cufflinks 0.745        
cufflinks 2.077       High
cufflinks 1.113        
cufflinks 0.766        
cufflinks 0.72        
cufflinks 0.683        
cufflinks 0.694        
cufflinks 1.289        
cufflinks 0.254       Low
cufflinks 1.631       High
cufflinks 1.36       High

0 Strain