Gene : Sobic.001G423700 S. bicolor v3.1.1
Defline:  (1 of 1) K13171 - serine/arginine repetitive matrix protein 1 (SRRM1, SRM160) Genomic Order:  4440
Name:  ? Sobic.001G423700 Secondary Identifier:  ? PAC:37937559
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G423700 0.5kb upstream 0.5kb upstream 7996 true Chr01: 70398296-70406291 Sorghum bicolor
Sobic.001G423700 0.5kb upstream 0.5kb upstream 500 false Chr01: 70398296-70398795 Sorghum bicolor
Sobic.001G423700 0.5kb downstream 0.5kb downstream 7996 true Chr01: 70398796-70406791 Sorghum bicolor
Sobic.001G423700 0.5kb downstream 0.5kb downstream 500 false Chr01: 70406292-70406791 Sorghum bicolor
Sobic.001G423700 1.0kb upstream 1.0kb upstream 8496 true Chr01: 70397796-70406291 Sorghum bicolor
Sobic.001G423700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 70397796-70398795 Sorghum bicolor
Sobic.001G423700 1.0kb downstream 1.0kb downstream 8496 true Chr01: 70398796-70407291 Sorghum bicolor
Sobic.001G423700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 70406292-70407291 Sorghum bicolor
Sobic.001G423700 2.0kb upstream 2.0kb upstream 9496 true Chr01: 70396796-70406291 Sorghum bicolor
Sobic.001G423700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 70396796-70398795 Sorghum bicolor
Sobic.001G423700 2.0kb downstream 2.0kb downstream 9496 true Chr01: 70398796-70408291 Sorghum bicolor
Sobic.001G423700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 70406292-70408291 Sorghum bicolor
Sobic.001G423700 5.0kb upstream 5.0kb upstream 12496 true Chr01: 70393796-70406291 Sorghum bicolor
Sobic.001G423700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 70393796-70398795 Sorghum bicolor
Sobic.001G423700 5.0kb downstream 5.0kb downstream 12496 true Chr01: 70398796-70411291 Sorghum bicolor
Sobic.001G423700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 70406292-70411291 Sorghum bicolor
Sobic.001G423700 10.0kb upstream 10.0kb upstream 17496 true Chr01: 70388796-70406291 Sorghum bicolor
Sobic.001G423700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 70388796-70398795 Sorghum bicolor
Sobic.001G423700 10.0kb downstream 10.0kb downstream 17496 true Chr01: 70398796-70416291 Sorghum bicolor
Sobic.001G423700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 70406292-70416291 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186245 5267 Panicoideae View MSA
124580940 5269 Grass View MSA
122044269 5273 Angiosperm View MSA
121345775 5274 Embryophyte View MSA
123427375 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.845        
cufflinks 2.936       Low
cufflinks 3.406       Low
cufflinks 3.678       Low
cufflinks 8.788        
cufflinks 7.136        
cufflinks 5.848        
cufflinks 2.786       Low
cufflinks 8.909       High
cufflinks 7.573        
cufflinks 6.811        
cufflinks 8.52        
cufflinks 6.869        
cufflinks 7.635        
cufflinks 6.024        
cufflinks 3.835       Low
cufflinks 5.629        
cufflinks 6.295        
cufflinks 6.346        
cufflinks 6.3        
cufflinks 13.328       High
cufflinks 7.14        
cufflinks 8.182        
cufflinks 7.649        
cufflinks 4.729        
cufflinks 2.641       Low
cufflinks 5.703        
cufflinks 6.853        
cufflinks 4.499        
cufflinks 6.962        

0 Strain