Gene : Sobic.005G140001 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR31062//PTHR31062:SF15 - FAMILY NOT NAMED // XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 4-RELATED Genomic Order:  1497
Name:  ? Sobic.005G140001 Secondary Identifier:  ? PAC:37923785
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.005G140001 0.5kb upstream 0.5kb upstream 2312 true Chr05: 59524787-59527098 Sorghum bicolor
Sobic.005G140001 0.5kb upstream 0.5kb upstream 500 false Chr05: 59524787-59525286 Sorghum bicolor
Sobic.005G140001 0.5kb downstream 0.5kb downstream 2312 true Chr05: 59525287-59527598 Sorghum bicolor
Sobic.005G140001 0.5kb downstream 0.5kb downstream 500 false Chr05: 59527099-59527598 Sorghum bicolor
Sobic.005G140001 1.0kb upstream 1.0kb upstream 2812 true Chr05: 59524287-59527098 Sorghum bicolor
Sobic.005G140001 1.0kb upstream 1.0kb upstream 1000 false Chr05: 59524287-59525286 Sorghum bicolor
Sobic.005G140001 1.0kb downstream 1.0kb downstream 2812 true Chr05: 59525287-59528098 Sorghum bicolor
Sobic.005G140001 1.0kb downstream 1.0kb downstream 1000 false Chr05: 59527099-59528098 Sorghum bicolor
Sobic.005G140001 2.0kb upstream 2.0kb upstream 3812 true Chr05: 59523287-59527098 Sorghum bicolor
Sobic.005G140001 2.0kb upstream 2.0kb upstream 2000 false Chr05: 59523287-59525286 Sorghum bicolor
Sobic.005G140001 2.0kb downstream 2.0kb downstream 3812 true Chr05: 59525287-59529098 Sorghum bicolor
Sobic.005G140001 2.0kb downstream 2.0kb downstream 2000 false Chr05: 59527099-59529098 Sorghum bicolor
Sobic.005G140001 5.0kb upstream 5.0kb upstream 6812 true Chr05: 59520287-59527098 Sorghum bicolor
Sobic.005G140001 5.0kb upstream 5.0kb upstream 5000 false Chr05: 59520287-59525286 Sorghum bicolor
Sobic.005G140001 5.0kb downstream 5.0kb downstream 6812 true Chr05: 59525287-59532098 Sorghum bicolor
Sobic.005G140001 5.0kb downstream 5.0kb downstream 5000 false Chr05: 59527099-59532098 Sorghum bicolor
Sobic.005G140001 10.0kb upstream 10.0kb upstream 11812 true Chr05: 59515287-59527098 Sorghum bicolor
Sobic.005G140001 10.0kb upstream 10.0kb upstream 10000 false Chr05: 59515287-59525286 Sorghum bicolor
Sobic.005G140001 10.0kb downstream 10.0kb downstream 11812 true Chr05: 59525287-59537098 Sorghum bicolor
Sobic.005G140001 10.0kb downstream 10.0kb downstream 10000 false Chr05: 59527099-59537098 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184944 5267 Panicoideae View MSA
124570001 5269 Grass View MSA
122042139 5273 Angiosperm View MSA
121350333 5274 Embryophyte View MSA
123381682 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 92.365     High High
cufflinks 0.03     Low Low
cufflinks 0.008     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 22.313     High  
cufflinks 0.181       Low
cufflinks 5.561        
cufflinks 16.853     High  
cufflinks 0.201       Low
cufflinks 3.589        
cufflinks 4.367        
cufflinks 2.577        
cufflinks 16.163     High  
cufflinks 11.671     High  
cufflinks 29.873     High  
cufflinks 0.014     Low Low
cufflinks 5.684        
cufflinks 4.759        
cufflinks 0.17       Low
cufflinks 4.494        
cufflinks 14.977     High  
cufflinks 29.255     High  
cufflinks 9.28        
cufflinks 12.979     High  
cufflinks 0.137       Low
cufflinks 0.199       Low
cufflinks 0.93        
cufflinks 1.333        
cufflinks 1.404        
cufflinks 5.644        

0 Strain