Gene : Sobic.001G420900 S. bicolor v3.1.1
Defline:  (1 of 69) KOG4412 - 26S proteasome regulatory complex, subunit PSMD10 Genomic Order:  4406
Name:  ? Sobic.001G420900 Secondary Identifier:  ? PAC:37944366
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G420900 0.5kb upstream 0.5kb upstream 5816 true Chr01: 70188037-70193852 Sorghum bicolor
Sobic.001G420900 0.5kb upstream 0.5kb upstream 500 false Chr01: 70188037-70188536 Sorghum bicolor
Sobic.001G420900 0.5kb downstream 0.5kb downstream 5816 true Chr01: 70188537-70194352 Sorghum bicolor
Sobic.001G420900 0.5kb downstream 0.5kb downstream 500 false Chr01: 70193853-70194352 Sorghum bicolor
Sobic.001G420900 1.0kb upstream 1.0kb upstream 6316 true Chr01: 70187537-70193852 Sorghum bicolor
Sobic.001G420900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 70187537-70188536 Sorghum bicolor
Sobic.001G420900 1.0kb downstream 1.0kb downstream 6316 true Chr01: 70188537-70194852 Sorghum bicolor
Sobic.001G420900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 70193853-70194852 Sorghum bicolor
Sobic.001G420900 2.0kb upstream 2.0kb upstream 7316 true Chr01: 70186537-70193852 Sorghum bicolor
Sobic.001G420900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 70186537-70188536 Sorghum bicolor
Sobic.001G420900 2.0kb downstream 2.0kb downstream 7316 true Chr01: 70188537-70195852 Sorghum bicolor
Sobic.001G420900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 70193853-70195852 Sorghum bicolor
Sobic.001G420900 5.0kb upstream 5.0kb upstream 10316 true Chr01: 70183537-70193852 Sorghum bicolor
Sobic.001G420900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 70183537-70188536 Sorghum bicolor
Sobic.001G420900 5.0kb downstream 5.0kb downstream 10316 true Chr01: 70188537-70198852 Sorghum bicolor
Sobic.001G420900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 70193853-70198852 Sorghum bicolor
Sobic.001G420900 10.0kb upstream 10.0kb upstream 15316 true Chr01: 70178537-70193852 Sorghum bicolor
Sobic.001G420900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 70178537-70188536 Sorghum bicolor
Sobic.001G420900 10.0kb downstream 10.0kb downstream 15316 true Chr01: 70188537-70203852 Sorghum bicolor
Sobic.001G420900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 70193853-70203852 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194172 5267 Panicoideae View MSA
124569045 5269 Grass View MSA
122045782 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121344984 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.796        
cufflinks 0.344       Low
cufflinks 0.176       Low
cufflinks 0.223       Low
cufflinks 2.312        
cufflinks 1.576        
cufflinks 2.729        
cufflinks 5.456       High
cufflinks 1.059        
cufflinks 0.464       Low
cufflinks 1.8        
cufflinks 1.433        
cufflinks 4.67       High
cufflinks 1.528        
cufflinks 1.757        
cufflinks 0.212       Low
cufflinks 2.49        
cufflinks 2.338        
cufflinks 0.88        
cufflinks 3.143        
cufflinks 2.318        
cufflinks 2.645        
cufflinks 1.361        
cufflinks 1.308        
cufflinks 0.271       Low
cufflinks 0.699        
cufflinks 1.32        
cufflinks 0.069     Low Low
cufflinks 6.199       High
cufflinks 0.988        

0 Strain