Gene : Sobic.001G413800 S. bicolor v3.1.1
Defline:  (1 of 1) K13141 - integrator complex subunit 4 (INTS4) Genomic Order:  4332
Name:  ? Sobic.001G413800 Secondary Identifier:  ? PAC:37938920
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G413800 0.5kb upstream 0.5kb upstream 5813 true Chr01: 69569899-69575711 Sorghum bicolor
Sobic.001G413800 0.5kb upstream 0.5kb upstream 500 false Chr01: 69569899-69570398 Sorghum bicolor
Sobic.001G413800 0.5kb downstream 0.5kb downstream 5813 true Chr01: 69570399-69576211 Sorghum bicolor
Sobic.001G413800 0.5kb downstream 0.5kb downstream 500 false Chr01: 69575712-69576211 Sorghum bicolor
Sobic.001G413800 1.0kb upstream 1.0kb upstream 6313 true Chr01: 69569399-69575711 Sorghum bicolor
Sobic.001G413800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 69569399-69570398 Sorghum bicolor
Sobic.001G413800 1.0kb downstream 1.0kb downstream 6313 true Chr01: 69570399-69576711 Sorghum bicolor
Sobic.001G413800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 69575712-69576711 Sorghum bicolor
Sobic.001G413800 2.0kb upstream 2.0kb upstream 7313 true Chr01: 69568399-69575711 Sorghum bicolor
Sobic.001G413800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 69568399-69570398 Sorghum bicolor
Sobic.001G413800 2.0kb downstream 2.0kb downstream 7313 true Chr01: 69570399-69577711 Sorghum bicolor
Sobic.001G413800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 69575712-69577711 Sorghum bicolor
Sobic.001G413800 5.0kb upstream 5.0kb upstream 10313 true Chr01: 69565399-69575711 Sorghum bicolor
Sobic.001G413800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 69565399-69570398 Sorghum bicolor
Sobic.001G413800 5.0kb downstream 5.0kb downstream 10313 true Chr01: 69570399-69580711 Sorghum bicolor
Sobic.001G413800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 69575712-69580711 Sorghum bicolor
Sobic.001G413800 10.0kb upstream 10.0kb upstream 15313 true Chr01: 69560399-69575711 Sorghum bicolor
Sobic.001G413800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 69560399-69570398 Sorghum bicolor
Sobic.001G413800 10.0kb downstream 10.0kb downstream 15313 true Chr01: 69570399-69585711 Sorghum bicolor
Sobic.001G413800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 69575712-69585711 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187607 5267 Panicoideae View MSA
124582333 5269 Grass View MSA
122048339 5273 Angiosperm View MSA
121350116 5274 Embryophyte View MSA
123381584 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.827        
cufflinks 0.115       Low
cufflinks 0.741        
cufflinks 1.215       High
cufflinks 1.638       High
cufflinks 0.609        
cufflinks 0.408        
cufflinks 0.27       Low
cufflinks 1.023        
cufflinks 1.267       High
cufflinks 0.456        
cufflinks 0.65        
cufflinks 1.236       High
cufflinks 0.55        
cufflinks 0.681        
cufflinks 0.334        
cufflinks 0.419        
cufflinks 0.448        
cufflinks 0.378        
cufflinks 0.576        
cufflinks 1.888       High
cufflinks 0.441        
cufflinks 0.495        
cufflinks 0.498        
cufflinks 0.255       Low
cufflinks 0.12       Low
cufflinks 0.866        
cufflinks 0.534        
cufflinks 0.526        
cufflinks 0.94        

0 Strain