Gene : Sobic.001G416900 S. bicolor v3.1.1
Defline:  (1 of 18) K11251 - histone H2A (H2A) Genomic Order:  4363
Name:  ? Sobic.001G416900 Secondary Identifier:  ? PAC:37944479
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G416900 0.5kb upstream 0.5kb upstream 1282 true Chr01: 69818341-69819622 Sorghum bicolor
Sobic.001G416900 0.5kb upstream 0.5kb upstream 500 false Chr01: 69818341-69818840 Sorghum bicolor
Sobic.001G416900 0.5kb downstream 0.5kb downstream 1282 true Chr01: 69818841-69820122 Sorghum bicolor
Sobic.001G416900 0.5kb downstream 0.5kb downstream 500 false Chr01: 69819623-69820122 Sorghum bicolor
Sobic.001G416900 1.0kb upstream 1.0kb upstream 1782 true Chr01: 69817841-69819622 Sorghum bicolor
Sobic.001G416900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 69817841-69818840 Sorghum bicolor
Sobic.001G416900 1.0kb downstream 1.0kb downstream 1782 true Chr01: 69818841-69820622 Sorghum bicolor
Sobic.001G416900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 69819623-69820622 Sorghum bicolor
Sobic.001G416900 2.0kb upstream 2.0kb upstream 2782 true Chr01: 69816841-69819622 Sorghum bicolor
Sobic.001G416900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 69816841-69818840 Sorghum bicolor
Sobic.001G416900 2.0kb downstream 2.0kb downstream 2782 true Chr01: 69818841-69821622 Sorghum bicolor
Sobic.001G416900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 69819623-69821622 Sorghum bicolor
Sobic.001G416900 5.0kb upstream 5.0kb upstream 5782 true Chr01: 69813841-69819622 Sorghum bicolor
Sobic.001G416900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 69813841-69818840 Sorghum bicolor
Sobic.001G416900 5.0kb downstream 5.0kb downstream 5782 true Chr01: 69818841-69824622 Sorghum bicolor
Sobic.001G416900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 69819623-69824622 Sorghum bicolor
Sobic.001G416900 10.0kb upstream 10.0kb upstream 10782 true Chr01: 69808841-69819622 Sorghum bicolor
Sobic.001G416900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 69808841-69818840 Sorghum bicolor
Sobic.001G416900 10.0kb downstream 10.0kb downstream 10782 true Chr01: 69818841-69829622 Sorghum bicolor
Sobic.001G416900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 69819623-69829622 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194535 5267 Panicoideae View MSA
124589713 5269 Grass View MSA
122048599 5273 Angiosperm View MSA
121351397 5274 Embryophyte View MSA
123427518 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.93     High  
cufflinks 0.504       Low
cufflinks 0.38       Low
cufflinks 0.841       Low
cufflinks 23.433     High  
cufflinks 2.715        
cufflinks 35.071     High  
cufflinks 2.421        
cufflinks 2.025        
cufflinks 4.859        
cufflinks 44.428     High High
cufflinks 16.437     High  
cufflinks 2.062        
cufflinks 25.607     High  
cufflinks 14.416     High  
cufflinks 0.581       Low
cufflinks 31.877     High  
cufflinks 30.245     High  
cufflinks 0.688       Low
cufflinks 14.145     High  
cufflinks 40.519     High  
cufflinks 74.257     High High
cufflinks 27.167     High  
cufflinks 23.75     High  
cufflinks 0.427       Low
cufflinks 0.331       Low
cufflinks 9.491        
cufflinks 3.622        
cufflinks 4.444        
cufflinks 39.164     High  

0 Strain