Gene : Sobic.001G410100 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR24055:SF214 - MITOGEN-ACTIVATED PROTEIN KINASE 3 Genomic Order:  4295
Name:  ? Sobic.001G410100 Secondary Identifier:  ? PAC:37940129
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G410100 0.5kb upstream 0.5kb upstream 5320 true Chr01: 69358589-69363908 Sorghum bicolor
Sobic.001G410100 0.5kb upstream 0.5kb upstream 500 false Chr01: 69358589-69359088 Sorghum bicolor
Sobic.001G410100 0.5kb downstream 0.5kb downstream 5320 true Chr01: 69359089-69364408 Sorghum bicolor
Sobic.001G410100 0.5kb downstream 0.5kb downstream 500 false Chr01: 69363909-69364408 Sorghum bicolor
Sobic.001G410100 1.0kb upstream 1.0kb upstream 5820 true Chr01: 69358089-69363908 Sorghum bicolor
Sobic.001G410100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 69358089-69359088 Sorghum bicolor
Sobic.001G410100 1.0kb downstream 1.0kb downstream 5820 true Chr01: 69359089-69364908 Sorghum bicolor
Sobic.001G410100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 69363909-69364908 Sorghum bicolor
Sobic.001G410100 2.0kb upstream 2.0kb upstream 6820 true Chr01: 69357089-69363908 Sorghum bicolor
Sobic.001G410100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 69357089-69359088 Sorghum bicolor
Sobic.001G410100 2.0kb downstream 2.0kb downstream 6820 true Chr01: 69359089-69365908 Sorghum bicolor
Sobic.001G410100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 69363909-69365908 Sorghum bicolor
Sobic.001G410100 5.0kb upstream 5.0kb upstream 9820 true Chr01: 69354089-69363908 Sorghum bicolor
Sobic.001G410100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 69354089-69359088 Sorghum bicolor
Sobic.001G410100 5.0kb downstream 5.0kb downstream 9820 true Chr01: 69359089-69368908 Sorghum bicolor
Sobic.001G410100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 69363909-69368908 Sorghum bicolor
Sobic.001G410100 10.0kb upstream 10.0kb upstream 14820 true Chr01: 69349089-69363908 Sorghum bicolor
Sobic.001G410100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 69349089-69359088 Sorghum bicolor
Sobic.001G410100 10.0kb downstream 10.0kb downstream 14820 true Chr01: 69359089-69373908 Sorghum bicolor
Sobic.001G410100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 69363909-69373908 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187359 5267 Panicoideae View MSA
124573611 5269 Grass View MSA
122050420 5273 Angiosperm View MSA
121352575 5274 Embryophyte View MSA
123428294 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.123        
cufflinks 10.604     High  
cufflinks 57.766     High High
cufflinks 50.788     High High
cufflinks 16.443     High  
cufflinks 42.971     High  
cufflinks 3.865        
cufflinks 9.324     High  
cufflinks 38.07     High  
cufflinks 28.182     High  
cufflinks 32.383     High  
cufflinks 7.115        
cufflinks 32.347     High  
cufflinks 6.746        
cufflinks 17.466     High  
cufflinks 13.639     High  
cufflinks 3.718        
cufflinks 2.91       Low
cufflinks 48.132     High  
cufflinks 5.942        
cufflinks 0.149       Low
cufflinks 6.632        
cufflinks 4.778        
cufflinks 5.096        
cufflinks 25.221     High  
cufflinks 11.542     High  
cufflinks 58.446     High High
cufflinks 5.546        
cufflinks 3.499        
cufflinks 12.734     High  

0 Strain