Gene : Sobic.001G412500 S. bicolor v3.1.1
Defline:  (1 of 1) K18732 - SAP domain-containing ribonucleoprotein (SARNP, CIP29, THO1) Genomic Order:  4319
Name:  ? Sobic.001G412500 Secondary Identifier:  ? PAC:37943311
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G412500 0.5kb upstream 0.5kb upstream 3227 true Chr01: 69494173-69497399 Sorghum bicolor
Sobic.001G412500 0.5kb upstream 0.5kb upstream 500 false Chr01: 69496900-69497399 Sorghum bicolor
Sobic.001G412500 0.5kb downstream 0.5kb downstream 3227 true Chr01: 69493673-69496899 Sorghum bicolor
Sobic.001G412500 0.5kb downstream 0.5kb downstream 500 false Chr01: 69493673-69494172 Sorghum bicolor
Sobic.001G412500 1.0kb upstream 1.0kb upstream 3727 true Chr01: 69494173-69497899 Sorghum bicolor
Sobic.001G412500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 69496900-69497899 Sorghum bicolor
Sobic.001G412500 1.0kb downstream 1.0kb downstream 3727 true Chr01: 69493173-69496899 Sorghum bicolor
Sobic.001G412500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 69493173-69494172 Sorghum bicolor
Sobic.001G412500 2.0kb upstream 2.0kb upstream 4727 true Chr01: 69494173-69498899 Sorghum bicolor
Sobic.001G412500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 69496900-69498899 Sorghum bicolor
Sobic.001G412500 2.0kb downstream 2.0kb downstream 4727 true Chr01: 69492173-69496899 Sorghum bicolor
Sobic.001G412500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 69492173-69494172 Sorghum bicolor
Sobic.001G412500 5.0kb upstream 5.0kb upstream 7727 true Chr01: 69494173-69501899 Sorghum bicolor
Sobic.001G412500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 69496900-69501899 Sorghum bicolor
Sobic.001G412500 5.0kb downstream 5.0kb downstream 7727 true Chr01: 69489173-69496899 Sorghum bicolor
Sobic.001G412500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 69489173-69494172 Sorghum bicolor
Sobic.001G412500 10.0kb upstream 10.0kb upstream 12727 true Chr01: 69494173-69506899 Sorghum bicolor
Sobic.001G412500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 69496900-69506899 Sorghum bicolor
Sobic.001G412500 10.0kb downstream 10.0kb downstream 12727 true Chr01: 69484173-69496899 Sorghum bicolor
Sobic.001G412500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 69484173-69494172 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184406 5267 Panicoideae View MSA
124578489 5269 Grass View MSA
122051388 5273 Angiosperm View MSA
121344836 5274 Embryophyte View MSA
123428142 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.041     High High
cufflinks 0.811       Low
cufflinks 2.404       Low
cufflinks 5.206        
cufflinks 15.624     High  
cufflinks 7.486        
cufflinks 10.752        
cufflinks 4.294        
cufflinks 9.267        
cufflinks 10.235        
cufflinks 10.393        
cufflinks 11.539        
cufflinks 9.774        
cufflinks 9.949        
cufflinks 13.436     High  
cufflinks 1.426       Low
cufflinks 10.844        
cufflinks 11.422        
cufflinks 1.107       Low
cufflinks 12.379     High  
cufflinks 27.461     High High
cufflinks 12.191     High  
cufflinks 11.96     High  
cufflinks 10.971        
cufflinks 0.866       Low
cufflinks 0.745       Low
cufflinks 10.812        
cufflinks 21.528     High High
cufflinks 8.263        
cufflinks 18.346     High  

0 Strain