Gene : Sobic.005G149700 S. bicolor v3.1.1
Defline:  similar to Expressed protein Genomic Order:  1592
Name:  ? Sobic.005G149700 Secondary Identifier:  ? PAC:37924102
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.005G149700 0.5kb upstream 0.5kb upstream 2872 true Chr05: 61853917-61856788 Sorghum bicolor
Sobic.005G149700 0.5kb upstream 0.5kb upstream 500 false Chr05: 61856289-61856788 Sorghum bicolor
Sobic.005G149700 0.5kb downstream 0.5kb downstream 2872 true Chr05: 61853417-61856288 Sorghum bicolor
Sobic.005G149700 0.5kb downstream 0.5kb downstream 500 false Chr05: 61853417-61853916 Sorghum bicolor
Sobic.005G149700 1.0kb upstream 1.0kb upstream 3372 true Chr05: 61853917-61857288 Sorghum bicolor
Sobic.005G149700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 61856289-61857288 Sorghum bicolor
Sobic.005G149700 1.0kb downstream 1.0kb downstream 3372 true Chr05: 61852917-61856288 Sorghum bicolor
Sobic.005G149700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 61852917-61853916 Sorghum bicolor
Sobic.005G149700 2.0kb upstream 2.0kb upstream 4372 true Chr05: 61853917-61858288 Sorghum bicolor
Sobic.005G149700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 61856289-61858288 Sorghum bicolor
Sobic.005G149700 2.0kb downstream 2.0kb downstream 4372 true Chr05: 61851917-61856288 Sorghum bicolor
Sobic.005G149700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 61851917-61853916 Sorghum bicolor
Sobic.005G149700 5.0kb upstream 5.0kb upstream 7372 true Chr05: 61853917-61861288 Sorghum bicolor
Sobic.005G149700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 61856289-61861288 Sorghum bicolor
Sobic.005G149700 5.0kb downstream 5.0kb downstream 7372 true Chr05: 61848917-61856288 Sorghum bicolor
Sobic.005G149700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 61848917-61853916 Sorghum bicolor
Sobic.005G149700 10.0kb upstream 10.0kb upstream 12372 true Chr05: 61853917-61866288 Sorghum bicolor
Sobic.005G149700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 61856289-61866288 Sorghum bicolor
Sobic.005G149700 10.0kb downstream 10.0kb downstream 12372 true Chr05: 61843917-61856288 Sorghum bicolor
Sobic.005G149700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 61843917-61853916 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176252 5267 Panicoideae View MSA
124576200 5269 Grass View MSA
122041953 5273 Angiosperm View MSA
121346344 5274 Embryophyte View MSA
123425331 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.532        
cufflinks 42.622     High High
cufflinks 19.284     High High
cufflinks 23.051     High High
cufflinks 1.224        
cufflinks 9.004        
cufflinks 8.355        
cufflinks 7.759        
cufflinks 1.447        
cufflinks 2.318        
cufflinks 0.524        
cufflinks 0.751        
cufflinks 0.705        
cufflinks 0.429        
cufflinks 5.075        
cufflinks 33.492     High High
cufflinks 8.632        
cufflinks 8.35        
cufflinks 21.127     High High
cufflinks 12.389     High High
cufflinks 0.618        
cufflinks 0.269       Low
cufflinks 0.595        
cufflinks 0.408       Low
cufflinks 42.267     High High
cufflinks 27.245     High High
cufflinks 0.958        
cufflinks 8.319        
cufflinks 2.703        
cufflinks 4.029        

0 Strain