Gene : Sobic.001G407200 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR11200//PTHR11200:SF120 - INOSITOL 5-PHOSPHATASE // PHOSPHOINOSITIDE PHOSPHATASE SAC6-RELATED Genomic Order:  4267
Name:  ? Sobic.001G407200 Secondary Identifier:  ? PAC:37942178
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-6368 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G407200 0.5kb upstream 0.5kb upstream 10454 true Chr01: 69142861-69153314 Sorghum bicolor
Sobic.001G407200 0.5kb upstream 0.5kb upstream 500 false Chr01: 69142861-69143360 Sorghum bicolor
Sobic.001G407200 0.5kb downstream 0.5kb downstream 10454 true Chr01: 69143361-69153814 Sorghum bicolor
Sobic.001G407200 0.5kb downstream 0.5kb downstream 500 false Chr01: 69153315-69153814 Sorghum bicolor
Sobic.001G407200 1.0kb upstream 1.0kb upstream 10954 true Chr01: 69142361-69153314 Sorghum bicolor
Sobic.001G407200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 69142361-69143360 Sorghum bicolor
Sobic.001G407200 1.0kb downstream 1.0kb downstream 10954 true Chr01: 69143361-69154314 Sorghum bicolor
Sobic.001G407200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 69153315-69154314 Sorghum bicolor
Sobic.001G407200 2.0kb upstream 2.0kb upstream 11954 true Chr01: 69141361-69153314 Sorghum bicolor
Sobic.001G407200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 69141361-69143360 Sorghum bicolor
Sobic.001G407200 2.0kb downstream 2.0kb downstream 11954 true Chr01: 69143361-69155314 Sorghum bicolor
Sobic.001G407200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 69153315-69155314 Sorghum bicolor
Sobic.001G407200 5.0kb upstream 5.0kb upstream 14954 true Chr01: 69138361-69153314 Sorghum bicolor
Sobic.001G407200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 69138361-69143360 Sorghum bicolor
Sobic.001G407200 5.0kb downstream 5.0kb downstream 14954 true Chr01: 69143361-69158314 Sorghum bicolor
Sobic.001G407200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 69153315-69158314 Sorghum bicolor
Sobic.001G407200 10.0kb upstream 10.0kb upstream 19954 true Chr01: 69133361-69153314 Sorghum bicolor
Sobic.001G407200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 69133361-69143360 Sorghum bicolor
Sobic.001G407200 10.0kb downstream 10.0kb downstream 19954 true Chr01: 69143361-69163314 Sorghum bicolor
Sobic.001G407200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 69153315-69163314 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181690 5267 Panicoideae View MSA
124573460 5269 Grass View MSA
122049709 5273 Angiosperm View MSA
121351625 5274 Embryophyte View MSA
123428410 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.211       Low
cufflinks 1.202        
cufflinks 1.495        
cufflinks 1.666        
cufflinks 1.41        
cufflinks 1.603        
cufflinks 0.911        
cufflinks 1.383        
cufflinks 1.652        
cufflinks 1.502        
cufflinks 1.294        
cufflinks 1.334        
cufflinks 1.568        
cufflinks 1.279        
cufflinks 1.507        
cufflinks 1.72        
cufflinks 0.723       Low
cufflinks 0.844        
cufflinks 1.697        
cufflinks 1.012        
cufflinks 1.908        
cufflinks 2.045       High
cufflinks 1.01        
cufflinks 1.075        
cufflinks 1.869        
cufflinks 1.224        
cufflinks 1.406        
cufflinks 0.246       Low
cufflinks 1.073        
cufflinks 1.272        

0 Strain