Gene : Sobic.001G407000 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR32285:SF14 - PROTEIN PMR5-RELATED Genomic Order:  4265
Name:  ? Sobic.001G407000 Secondary Identifier:  ? PAC:37940226
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G407000 0.5kb upstream 0.5kb upstream 2887 true Chr01: 69127568-69130454 Sorghum bicolor
Sobic.001G407000 0.5kb upstream 0.5kb upstream 500 false Chr01: 69129955-69130454 Sorghum bicolor
Sobic.001G407000 0.5kb downstream 0.5kb downstream 2887 true Chr01: 69127068-69129954 Sorghum bicolor
Sobic.001G407000 0.5kb downstream 0.5kb downstream 500 false Chr01: 69127068-69127567 Sorghum bicolor
Sobic.001G407000 1.0kb upstream 1.0kb upstream 3387 true Chr01: 69127568-69130954 Sorghum bicolor
Sobic.001G407000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 69129955-69130954 Sorghum bicolor
Sobic.001G407000 1.0kb downstream 1.0kb downstream 3387 true Chr01: 69126568-69129954 Sorghum bicolor
Sobic.001G407000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 69126568-69127567 Sorghum bicolor
Sobic.001G407000 2.0kb upstream 2.0kb upstream 4387 true Chr01: 69127568-69131954 Sorghum bicolor
Sobic.001G407000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 69129955-69131954 Sorghum bicolor
Sobic.001G407000 2.0kb downstream 2.0kb downstream 4387 true Chr01: 69125568-69129954 Sorghum bicolor
Sobic.001G407000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 69125568-69127567 Sorghum bicolor
Sobic.001G407000 5.0kb upstream 5.0kb upstream 7387 true Chr01: 69127568-69134954 Sorghum bicolor
Sobic.001G407000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 69129955-69134954 Sorghum bicolor
Sobic.001G407000 5.0kb downstream 5.0kb downstream 7387 true Chr01: 69122568-69129954 Sorghum bicolor
Sobic.001G407000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 69122568-69127567 Sorghum bicolor
Sobic.001G407000 10.0kb upstream 10.0kb upstream 12387 true Chr01: 69127568-69139954 Sorghum bicolor
Sobic.001G407000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 69129955-69139954 Sorghum bicolor
Sobic.001G407000 10.0kb downstream 10.0kb downstream 12387 true Chr01: 69117568-69129954 Sorghum bicolor
Sobic.001G407000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 69117568-69127567 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187088 5267 Panicoideae View MSA
124589504 5269 Grass View MSA
122042931 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121310047 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.934        
cufflinks 0.035     Low Low
cufflinks 0.006     Low Low
cufflinks 0.032     Low Low
cufflinks 1.446        
cufflinks 0.347        
cufflinks 1.886        
cufflinks 1.425        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.156        
cufflinks 1.443        
cufflinks 0.416        
cufflinks 0.139        
cufflinks 1.612        
cufflinks 0.043     Low Low
cufflinks 0.01     Low Low
cufflinks 2.021        
cufflinks 1.821        
cufflinks 0.06     Low Low
cufflinks 1.63        
cufflinks 0.209        
cufflinks 0.682        
cufflinks 0.576        
cufflinks 0.64        
cufflinks 0.019     Low Low
cufflinks 0.056       Low
cufflinks 0.504        
cufflinks 0.133        
cufflinks 5.167       High
cufflinks 0.116        

0 Strain